Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC23.49■■□□□ 1.35
SHROOM1Q2M3G4 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC23.49■■□□□ 1.35
SHROOM1Q2M3G4 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SHROOM1Q2M3G4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
SHROOM1Q2M3G4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC23.49■■□□□ 1.35
SHROOM1Q2M3G4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
SHROOM1Q2M3G4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SHROOM1Q2M3G4 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
SHROOM1Q2M3G4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SHROOM1Q2M3G4 AC006128.1-201ENST00000624704 1661 ntBASIC23.48■■□□□ 1.35
SHROOM1Q2M3G4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SHROOM1Q2M3G4 KRT16P5-201ENST00000455284 522 ntBASIC23.48■■□□□ 1.35
SHROOM1Q2M3G4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SHROOM1Q2M3G4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SHROOM1Q2M3G4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC23.48■■□□□ 1.35
SHROOM1Q2M3G4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC23.48■■□□□ 1.35
SHROOM1Q2M3G4 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SHROOM1Q2M3G4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SHROOM1Q2M3G4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC23.48■■□□□ 1.35
SHROOM1Q2M3G4 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC23.48■■□□□ 1.35
SHROOM1Q2M3G4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC23.47■■□□□ 1.35
SHROOM1Q2M3G4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
SHROOM1Q2M3G4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SHROOM1Q2M3G4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
SHROOM1Q2M3G4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SHROOM1Q2M3G4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC23.47■■□□□ 1.35
SHROOM1Q2M3G4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC23.47■■□□□ 1.35
SHROOM1Q2M3G4 AL031963.3-201ENST00000606441 850 ntBASIC23.47■■□□□ 1.35
SHROOM1Q2M3G4 AL353708.3-201ENST00000610272 989 ntBASIC23.47■■□□□ 1.35
SHROOM1Q2M3G4 AC026471.5-201ENST00000615068 467 ntBASIC23.47■■□□□ 1.35
SHROOM1Q2M3G4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SHROOM1Q2M3G4 DPP3P2-201ENST00000416030 1696 ntBASIC23.47■■□□□ 1.35
SHROOM1Q2M3G4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC23.47■■□□□ 1.35
SHROOM1Q2M3G4 BID-203ENST00000399765 1879 ntTSL 2 BASIC23.47■■□□□ 1.35
SHROOM1Q2M3G4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SHROOM1Q2M3G4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SHROOM1Q2M3G4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC23.46■■□□□ 1.35
SHROOM1Q2M3G4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
SHROOM1Q2M3G4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SHROOM1Q2M3G4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
SHROOM1Q2M3G4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
SHROOM1Q2M3G4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
SHROOM1Q2M3G4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC23.46■■□□□ 1.35
SHROOM1Q2M3G4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC23.46■■□□□ 1.35
SHROOM1Q2M3G4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC23.46■■□□□ 1.35
SHROOM1Q2M3G4 AP003071.4-201ENST00000562276 1284 ntBASIC23.46■■□□□ 1.35
SHROOM1Q2M3G4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SHROOM1Q2M3G4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC23.46■■□□□ 1.35
SHROOM1Q2M3G4 CD177P1-201ENST00000606252 935 ntBASIC23.46■■□□□ 1.35
SHROOM1Q2M3G4 AP001412.1-201ENST00000608405 714 ntBASIC23.46■■□□□ 1.35
SHROOM1Q2M3G4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
SHROOM1Q2M3G4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC23.46■■□□□ 1.35
SHROOM1Q2M3G4 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
SHROOM1Q2M3G4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
SHROOM1Q2M3G4 AL121906.2-201ENST00000621597 723 ntBASIC23.46■■□□□ 1.35
SHROOM1Q2M3G4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC23.46■■□□□ 1.35
SHROOM1Q2M3G4 AC133561.5-201ENST00000635547 218 ntBASIC23.46■■□□□ 1.35
SHROOM1Q2M3G4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.46■■□□□ 1.35
SHROOM1Q2M3G4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.35
SHROOM1Q2M3G4 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
SHROOM1Q2M3G4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC23.45■■□□□ 1.35
SHROOM1Q2M3G4 AC007225.1-201ENST00000566331 1836 ntBASIC23.45■■□□□ 1.34
SHROOM1Q2M3G4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
SHROOM1Q2M3G4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.34
SHROOM1Q2M3G4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC23.45■■□□□ 1.34
SHROOM1Q2M3G4 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
SHROOM1Q2M3G4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
SHROOM1Q2M3G4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
SHROOM1Q2M3G4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC23.45■■□□□ 1.34
SHROOM1Q2M3G4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC23.45■■□□□ 1.34
SHROOM1Q2M3G4 KRT18P21-201ENST00000515767 1272 ntBASIC23.45■■□□□ 1.34
SHROOM1Q2M3G4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC23.45■■□□□ 1.34
SHROOM1Q2M3G4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC23.45■■□□□ 1.34
SHROOM1Q2M3G4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC23.45■■□□□ 1.34
SHROOM1Q2M3G4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
SHROOM1Q2M3G4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
SHROOM1Q2M3G4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC23.45■■□□□ 1.34
SHROOM1Q2M3G4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
SHROOM1Q2M3G4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC23.45■■□□□ 1.34
SHROOM1Q2M3G4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
SHROOM1Q2M3G4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
SHROOM1Q2M3G4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC23.44■■□□□ 1.34
SHROOM1Q2M3G4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC23.44■■□□□ 1.34
SHROOM1Q2M3G4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
SHROOM1Q2M3G4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
SHROOM1Q2M3G4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC23.44■■□□□ 1.34
SHROOM1Q2M3G4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
SHROOM1Q2M3G4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC23.44■■□□□ 1.34
SHROOM1Q2M3G4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC23.44■■□□□ 1.34
SHROOM1Q2M3G4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC23.44■■□□□ 1.34
SHROOM1Q2M3G4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC23.44■■□□□ 1.34
SHROOM1Q2M3G4 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC23.44■■□□□ 1.34
SHROOM1Q2M3G4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC23.44■■□□□ 1.34
SHROOM1Q2M3G4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
SHROOM1Q2M3G4 AC007375.3-201ENST00000600936 2314 ntBASIC23.44■■□□□ 1.34
SHROOM1Q2M3G4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
SHROOM1Q2M3G4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
SHROOM1Q2M3G4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
SHROOM1Q2M3G4 KRT8P20-201ENST00000423953 1409 ntBASIC23.43■■□□□ 1.34
SHROOM1Q2M3G4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms