Protein–RNA interactions for Protein: Q16695

HIST3H3, Histone H3.1t, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H3Q16695 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.69■□□□□ 0.42
HIST3H3Q16695 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
HIST3H3Q16695 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIST3H3Q16695 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HIST3H3Q16695 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HIST3H3Q16695 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
HIST3H3Q16695 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.69■□□□□ 0.42
HIST3H3Q16695 DUSP5P2-201ENST00000426873 1033 ntBASIC17.69■□□□□ 0.42
HIST3H3Q16695 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.69■□□□□ 0.42
HIST3H3Q16695 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.69■□□□□ 0.42
HIST3H3Q16695 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.69■□□□□ 0.42
HIST3H3Q16695 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.69■□□□□ 0.42
HIST3H3Q16695 AC090192.1-201ENST00000517740 490 ntBASIC17.69■□□□□ 0.42
HIST3H3Q16695 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HIST3H3Q16695 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HIST3H3Q16695 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIST3H3Q16695 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.69■□□□□ 0.42
HIST3H3Q16695 MIR4758-201ENST00000577688 71 ntBASIC17.69■□□□□ 0.42
HIST3H3Q16695 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.69■□□□□ 0.42
HIST3H3Q16695 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.69■□□□□ 0.42
HIST3H3Q16695 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIST3H3Q16695 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
HIST3H3Q16695 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIST3H3Q16695 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIST3H3Q16695 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIST3H3Q16695 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HIST3H3Q16695 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
HIST3H3Q16695 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIST3H3Q16695 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
HIST3H3Q16695 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST3H3Q16695 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HIST3H3Q16695 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST3H3Q16695 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST3H3Q16695 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST3H3Q16695 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST3H3Q16695 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.68■□□□□ 0.42
HIST3H3Q16695 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST3H3Q16695 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST3H3Q16695 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
HIST3H3Q16695 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST3H3Q16695 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST3H3Q16695 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST3H3Q16695 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.68■□□□□ 0.42
HIST3H3Q16695 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HIST3H3Q16695 KRT16P6-202ENST00000425692 1426 ntBASIC17.68■□□□□ 0.42
HIST3H3Q16695 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.68■□□□□ 0.42
HIST3H3Q16695 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST3H3Q16695 AC073210.2-201ENST00000430369 194 ntBASIC17.68■□□□□ 0.42
HIST3H3Q16695 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.68■□□□□ 0.42
HIST3H3Q16695 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.68■□□□□ 0.42
HIST3H3Q16695 AC091874.3-201ENST00000512672 1195 ntBASIC17.68■□□□□ 0.42
HIST3H3Q16695 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.68■□□□□ 0.42
HIST3H3Q16695 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.68■□□□□ 0.42
HIST3H3Q16695 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.68■□□□□ 0.42
HIST3H3Q16695 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.68■□□□□ 0.42
HIST3H3Q16695 MYC-209ENST00000641252 345 ntBASIC17.68■□□□□ 0.42
HIST3H3Q16695 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.68■□□□□ 0.42
HIST3H3Q16695 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HIST3H3Q16695 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HIST3H3Q16695 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIST3H3Q16695 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIST3H3Q16695 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HIST3H3Q16695 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIST3H3Q16695 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.67■□□□□ 0.42
HIST3H3Q16695 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HIST3H3Q16695 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.67■□□□□ 0.42
HIST3H3Q16695 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.67■□□□□ 0.42
HIST3H3Q16695 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HIST3H3Q16695 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIST3H3Q16695 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.67■□□□□ 0.42
HIST3H3Q16695 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.67■□□□□ 0.42
HIST3H3Q16695 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HIST3H3Q16695 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
HIST3H3Q16695 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.67■□□□□ 0.42
HIST3H3Q16695 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HIST3H3Q16695 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.67■□□□□ 0.42
HIST3H3Q16695 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.67■□□□□ 0.42
HIST3H3Q16695 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HIST3H3Q16695 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.66■□□□□ 0.42
HIST3H3Q16695 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST3H3Q16695 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.66■□□□□ 0.42
HIST3H3Q16695 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST3H3Q16695 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST3H3Q16695 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.66■□□□□ 0.42
HIST3H3Q16695 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
HIST3H3Q16695 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST3H3Q16695 TMEM179-206ENST00000616017 1645 ntBASIC17.66■□□□□ 0.42
HIST3H3Q16695 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HIST3H3Q16695 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST3H3Q16695 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST3H3Q16695 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HIST3H3Q16695 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HIST3H3Q16695 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
HIST3H3Q16695 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HIST3H3Q16695 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.66■□□□□ 0.42
HIST3H3Q16695 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
HIST3H3Q16695 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST3H3Q16695 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST3H3Q16695 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST3H3Q16695 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms