Protein–RNA interactions for Protein: Q08685

CLP1, mRNA cleavage and polyadenylation factor CLP1, yeastyeast

Predicted RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CLP1Q08685 ALY2YJL084C 3141 nt0.83□□□□□ -2.28
CLP1Q08685 PTP2YOR208W 2253 nt0.82□□□□□ -2.28
CLP1Q08685 STE5YDR103W 2754 nt0.82□□□□□ -2.28
CLP1Q08685 snR60snR60 104 nt0.82□□□□□ -2.28
CLP1Q08685 YDR344CYDR344C 444 nt0.82□□□□□ -2.28
CLP1Q08685 YDR521WYDR521W 336 nt0.82□□□□□ -2.28
CLP1Q08685 YIL032CYIL032C 357 nt0.82□□□□□ -2.28
CLP1Q08685 PDE2YOR360C 1581 nt0.82□□□□□ -2.28
CLP1Q08685 HMRA2YCR096C 360 nt0.81□□□□□ -2.28
CLP1Q08685 RPL39YJL189W 156 nt0.81□□□□□ -2.28
CLP1Q08685 GEA2YEL022W 4380 nt0.8□□□□□ -2.28
CLP1Q08685 RPS25BYLR333C 327 nt0.8□□□□□ -2.28
CLP1Q08685 YMR031W-AYMR031W-A 327 nt0.8□□□□□ -2.28
CLP1Q08685 RKR1YMR247C 4689 nt0.79□□□□□ -2.28
CLP1Q08685 YJL120WYJL120W 324 nt0.79□□□□□ -2.28
CLP1Q08685 YNL146WYNL146W 303 nt0.79□□□□□ -2.28
CLP1Q08685 YBR200W-AYBR200W-A 165 nt0.79□□□□□ -2.28
CLP1Q08685 SPO21YOL091W 1830 nt0.79□□□□□ -2.28
CLP1Q08685 WAR1YML076C 2835 nt0.79□□□□□ -2.28
CLP1Q08685 VIK1YPL253C 1944 nt0.78□□□□□ -2.28
CLP1Q08685 ECM12YHR021W-A 456 nt0.78□□□□□ -2.28
CLP1Q08685 CMC4YMR194C-B 222 nt0.78□□□□□ -2.28
CLP1Q08685 YOR011W-AYOR011W-A 207 nt0.78□□□□□ -2.28
CLP1Q08685 YBR064WYBR064W 429 nt0.78□□□□□ -2.28
CLP1Q08685 ALG13YGL047W 609 nt0.77□□□□□ -2.29
CLP1Q08685 YHL042WYHL042W 453 nt0.77□□□□□ -2.29
CLP1Q08685 YPR159C-AYPR159C-A 102 nt0.77□□□□□ -2.29
CLP1Q08685 COG8YML071C 1824 nt0.77□□□□□ -2.29
CLP1Q08685 PAN2YGL094C 3348 nt0.76□□□□□ -2.29
CLP1Q08685 tT(AGU)BtT(AGU)B 73 nt0.76□□□□□ -2.29
CLP1Q08685 tT(AGU)CtT(AGU)C 73 nt0.76□□□□□ -2.29
CLP1Q08685 tT(AGU)DtT(AGU)D 73 nt0.76□□□□□ -2.29
CLP1Q08685 tT(AGU)HtT(AGU)H 73 nt0.76□□□□□ -2.29
CLP1Q08685 tT(AGU)I1tT(AGU)I1 73 nt0.76□□□□□ -2.29
CLP1Q08685 tT(AGU)I2tT(AGU)I2 73 nt0.76□□□□□ -2.29
CLP1Q08685 tT(AGU)JtT(AGU)J 73 nt0.76□□□□□ -2.29
CLP1Q08685 tT(AGU)N1tT(AGU)N1 73 nt0.76□□□□□ -2.29
CLP1Q08685 tT(AGU)N2tT(AGU)N2 73 nt0.76□□□□□ -2.29
CLP1Q08685 tT(AGU)O1tT(AGU)O1 73 nt0.76□□□□□ -2.29
CLP1Q08685 tT(AGU)O2tT(AGU)O2 73 nt0.76□□□□□ -2.29
CLP1Q08685 YPR010C-AYPR010C-A 219 nt0.76□□□□□ -2.29
CLP1Q08685 RPS27BYHR021C 249 nt0.75□□□□□ -2.29
CLP1Q08685 YMR321CYMR321C 318 nt0.75□□□□□ -2.29
CLP1Q08685 CSE2YNR010W 450 nt0.75□□□□□ -2.29
CLP1Q08685 OLI1Q0130 231 nt0.74□□□□□ -2.29
CLP1Q08685 YOR218CYOR218C 420 nt0.74□□□□□ -2.29
CLP1Q08685 RAD61YDR014W 1944 nt0.74□□□□□ -2.29
CLP1Q08685 MCM10YIL150C 1716 nt0.73□□□□□ -2.29
CLP1Q08685 YGR069WYGR069W 336 nt0.73□□□□□ -2.29
CLP1Q08685 YNL028WYNL028W 318 nt0.73□□□□□ -2.29
CLP1Q08685 SGF11YPL047W 300 nt0.73□□□□□ -2.29
CLP1Q08685 snR65snR65 100 nt0.72□□□□□ -2.29
CLP1Q08685 YNL277W-AYNL277W-A 189 nt0.72□□□□□ -2.29
CLP1Q08685 SEC1YDR164C 2175 nt0.72□□□□□ -2.29
CLP1Q08685 YOR015WYOR015W 360 nt0.71□□□□□ -2.3
CLP1Q08685 IES4YOR189W 351 nt0.71□□□□□ -2.3
CLP1Q08685 BIR1YJR089W 2865 nt0.71□□□□□ -2.3
CLP1Q08685 YOR231C-AYOR231C-A 201 nt0.7□□□□□ -2.3
CLP1Q08685 YNL211CYNL211C 261 nt0.69□□□□□ -2.3
CLP1Q08685 ULP2YIL031W 3105 nt0.69□□□□□ -2.3
CLP1Q08685 YDL196WYDL196W 330 nt0.68□□□□□ -2.3
CLP1Q08685 YDR354C-AYDR354C-A 144 nt0.68□□□□□ -2.3
CLP1Q08685 YLR120W-AYLR120W-A 102 nt0.68□□□□□ -2.3
CLP1Q08685 YMR272W-AYMR272W-A 114 nt0.68□□□□□ -2.3
CLP1Q08685 YOL014WYOL014W 375 nt0.68□□□□□ -2.3
CLP1Q08685 NOP9YJL010C 2001 nt0.67□□□□□ -2.3
CLP1Q08685 YEL020C-BYEL020C-B 198 nt0.67□□□□□ -2.3
CLP1Q08685 YOR008C-AYOR008C-A 225 nt0.67□□□□□ -2.3
CLP1Q08685 ISD11YER048W-A 285 nt0.66□□□□□ -2.3
CLP1Q08685 YGL052WYGL052W 306 nt0.66□□□□□ -2.3
CLP1Q08685 YJL197C-AYJL197C-A 282 nt0.66□□□□□ -2.3
CLP1Q08685 YMR172C-AYMR172C-A 384 nt0.66□□□□□ -2.3
CLP1Q08685 YPL044CYPL044C 549 nt0.66□□□□□ -2.3
CLP1Q08685 YPR092WYPR092W 306 nt0.66□□□□□ -2.3
CLP1Q08685 BFR2YDR299W 1605 nt0.65□□□□□ -2.31
CLP1Q08685 YER181CYER181C 324 nt0.65□□□□□ -2.31
CLP1Q08685 YFR012W-AYFR012W-A 87 nt0.65□□□□□ -2.31
CLP1Q08685 PAA1YDR071C 576 nt0.64□□□□□ -2.31
CLP1Q08685 YLL019W-AYLL019W-A 93 nt0.64□□□□□ -2.31
CLP1Q08685 FMP27YLR454W 7887 nt0.63□□□□□ -2.31
CLP1Q08685 snR74snR74 88 nt0.63□□□□□ -2.31
CLP1Q08685 YOR282WYOR282W 321 nt0.63□□□□□ -2.31
CLP1Q08685 YJL026C-AYJL026C-A 222 nt0.62□□□□□ -2.31
CLP1Q08685 YKL145W-AYKL145W-A 93 nt0.62□□□□□ -2.31
CLP1Q08685 YML099W-AYML099W-A 330 nt0.62□□□□□ -2.31
CLP1Q08685 YOR072W-BYOR072W-B 162 nt0.62□□□□□ -2.31
CLP1Q08685 YPL152W-AYPL152W-A 99 nt0.62□□□□□ -2.31
CLP1Q08685 LTE1YAL024C 4308 nt0.62□□□□□ -2.31
CLP1Q08685 ASE1YOR058C 2658 nt0.61□□□□□ -2.31
CLP1Q08685 YDL185C-AYDL185C-A 228 nt0.61□□□□□ -2.31
CLP1Q08685 RPL26BYGR034W 384 nt0.61□□□□□ -2.31
CLP1Q08685 YAL067W-AYAL067W-A 228 nt0.61□□□□□ -2.31
CLP1Q08685 AI1Q0050 2505 nt0.6□□□□□ -2.31
CLP1Q08685 PMP1YCR024C-A 123 nt0.6□□□□□ -2.31
CLP1Q08685 YML002WYML002W 2214 nt0.6□□□□□ -2.31
CLP1Q08685 IQG1YPL242C 4488 nt0.6□□□□□ -2.31
CLP1Q08685 YCR018C-AYCR018C-A 255 nt0.59□□□□□ -2.31
CLP1Q08685 snR49snR49 165 nt0.59□□□□□ -2.31
CLP1Q08685 YMR307C-AYMR307C-A 195 nt0.58□□□□□ -2.32
CLP1Q08685 COY1YKL179C 2040 nt0.57□□□□□ -2.32
Retrieved 100 of 7,029 protein–RNA pairs in 46.9 ms