Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 YMR304C-AYMR304C-A 351 nt-2.25□□□□□ -2.77
VPS13Q07878 YBR072C-AYBR072C-A 162 nt-2.25□□□□□ -2.77
VPS13Q07878 ATP20YPR020W 348 nt-2.26□□□□□ -2.77
VPS13Q07878 AGA2YGL032C 264 nt-2.26□□□□□ -2.77
VPS13Q07878 YJL135WYJL135W 318 nt-2.26□□□□□ -2.77
VPS13Q07878 YGR240C-AYGR240C-A 201 nt-2.27□□□□□ -2.77
VPS13Q07878 YGL042CYGL042C 306 nt-2.28□□□□□ -2.77
VPS13Q07878 YKL115CYKL115C 393 nt-2.28□□□□□ -2.77
VPS13Q07878 YGR204C-AYGR204C-A 114 nt-2.29□□□□□ -2.78
VPS13Q07878 YOR121CYOR121C 306 nt-2.3□□□□□ -2.78
VPS13Q07878 YPL229WYPL229W 621 nt-2.3□□□□□ -2.78
VPS13Q07878 YGL239CYGL239C 315 nt-2.31□□□□□ -2.78
VPS13Q07878 snR39BsnR39B 96 nt-2.31□□□□□ -2.78
VPS13Q07878 YGL052WYGL052W 306 nt-2.32□□□□□ -2.78
VPS13Q07878 YML108WYML108W 318 nt-2.32□□□□□ -2.78
VPS13Q07878 RUF20RUF20 443 nt-2.33□□□□□ -2.78
VPS13Q07878 YOR309CYOR309C 381 nt-2.33□□□□□ -2.78
VPS13Q07878 YOR170WYOR170W 306 nt-2.34□□□□□ -2.78
VPS13Q07878 MFA1YDR461W 111 nt-2.34□□□□□ -2.78
VPS13Q07878 RPS30AYLR287C-A 192 nt-2.35□□□□□ -2.79
VPS13Q07878 YBL008W-AYBL008W-A 240 nt-2.37□□□□□ -2.79
VPS13Q07878 YPR092WYPR092W 306 nt-2.37□□□□□ -2.79
VPS13Q07878 YDL185C-AYDL185C-A 228 nt-2.37□□□□□ -2.79
VPS13Q07878 YDR008CYDR008C 351 nt-2.37□□□□□ -2.79
VPS13Q07878 MRPL31YKL138C 396 nt-2.37□□□□□ -2.79
VPS13Q07878 YLR264C-AYLR264C-A 117 nt-2.38□□□□□ -2.79
VPS13Q07878 JLP2YMR132C 627 nt-2.38□□□□□ -2.79
VPS13Q07878 YNL205CYNL205C 423 nt-2.39□□□□□ -2.79
VPS13Q07878 YCR024C-BYCR024C-B 267 nt-2.4□□□□□ -2.79
VPS13Q07878 YOR192C-CYOR192C-C 237 nt-2.4□□□□□ -2.79
VPS13Q07878 PET20YPL159C 762 nt-2.4□□□□□ -2.79
VPS13Q07878 YHR145CYHR145C 357 nt-2.41□□□□□ -2.8
VPS13Q07878 snR5snR5 204 nt-2.42□□□□□ -2.8
VPS13Q07878 YMR172C-AYMR172C-A 384 nt-2.42□□□□□ -2.8
VPS13Q07878 YBR051WYBR051W 351 nt-2.42□□□□□ -2.8
VPS13Q07878 YIR044CYIR044C 186 nt-2.43□□□□□ -2.8
VPS13Q07878 SDS22YKL193C 1017 nt-2.43□□□□□ -2.8
VPS13Q07878 RPL22BYFL034C-A 369 nt-2.44□□□□□ -2.8
VPS13Q07878 YCR018C-AYCR018C-A 255 nt-2.44□□□□□ -2.8
VPS13Q07878 RPS27BYHR021C 249 nt-2.47□□□□□ -2.81
VPS13Q07878 MRPL25YGR076C 474 nt-2.48□□□□□ -2.81
VPS13Q07878 YPR099CYPR099C 357 nt-2.49□□□□□ -2.81
VPS13Q07878 YFL012WYFL012W 447 nt-2.49□□□□□ -2.81
VPS13Q07878 YLR146W-AYLR146W-A 189 nt-2.5□□□□□ -2.81
VPS13Q07878 SPC24YMR117C 642 nt-2.5□□□□□ -2.81
VPS13Q07878 MRPL32YCR003W 552 nt-2.5□□□□□ -2.81
VPS13Q07878 IRC13YOR235W 315 nt-2.5□□□□□ -2.81
VPS13Q07878 ATP19YOL077W-A 207 nt-2.51□□□□□ -2.81
VPS13Q07878 RPL29YFR032C-A 180 nt-2.51□□□□□ -2.81
VPS13Q07878 SPO12YHR152W 522 nt-2.51□□□□□ -2.81
VPS13Q07878 YPL261CYPL261C 309 nt-2.51□□□□□ -2.81
VPS13Q07878 YER138W-AYER138W-A 105 nt-2.52□□□□□ -2.81
VPS13Q07878 DFG10YIL049W 762 nt-2.52□□□□□ -2.81
VPS13Q07878 YDR290WYDR290W 330 nt-2.53□□□□□ -2.81
VPS13Q07878 YLR202CYLR202C 327 nt-2.54□□□□□ -2.82
VPS13Q07878 RSM18YER050C 417 nt-2.55□□□□□ -2.82
VPS13Q07878 MND1YGL183C 660 nt-2.55□□□□□ -2.82
VPS13Q07878 YGR228WYGR228W 345 nt-2.57□□□□□ -2.82
VPS13Q07878 CUP1-1YHR053C 186 nt-2.58□□□□□ -2.82
VPS13Q07878 CUP1-2YHR055C 186 nt-2.58□□□□□ -2.82
VPS13Q07878 SDH6YDR379C-A 240 nt-2.59□□□□□ -2.82
VPS13Q07878 BI2Q0110 1272 nt-2.6□□□□□ -2.83
VPS13Q07878 YOL083C-AYOL083C-A 141 nt-2.61□□□□□ -2.83
VPS13Q07878 YER053C-AYER053C-A 114 nt-2.62□□□□□ -2.83
VPS13Q07878 YMR315W-AYMR315W-A 108 nt-2.62□□□□□ -2.83
VPS13Q07878 YDR269CYDR269C 324 nt-2.64□□□□□ -2.83
VPS13Q07878 YPT6YLR262C 648 nt-2.64□□□□□ -2.83
VPS13Q07878 YNL058CYNL058C 951 nt-2.64□□□□□ -2.83
VPS13Q07878 YGR025WYGR025W 303 nt-2.64□□□□□ -2.83
VPS13Q07878 YOR011W-AYOR011W-A 207 nt-2.67□□□□□ -2.84
VPS13Q07878 YDR048CYDR048C 315 nt-2.68□□□□□ -2.84
VPS13Q07878 CMS1YLR003C 876 nt-2.72□□□□□ -2.85
VPS13Q07878 YER046W-AYER046W-A 330 nt-2.73□□□□□ -2.85
VPS13Q07878 YFR009W-AYFR009W-A 258 nt-2.73□□□□□ -2.85
VPS13Q07878 15S_rRNA15S_rRNA 1649 nt-2.75□□□□□ -2.85
VPS13Q07878 YDR524W-CYDR524W-C 90 nt-2.76□□□□□ -2.85
VPS13Q07878 YJL032WYJL032W 315 nt-2.77□□□□□ -2.85
VPS13Q07878 SGF11YPL047W 300 nt-2.79□□□□□ -2.86
VPS13Q07878 YMR193C-AYMR193C-A 387 nt-2.8□□□□□ -2.86
VPS13Q07878 snR79snR79 84 nt-2.82□□□□□ -2.86
VPS13Q07878 YML047W-AYML047W-A 366 nt-2.82□□□□□ -2.86
VPS13Q07878 YER090C-AYER090C-A 90 nt-2.83□□□□□ -2.86
VPS13Q07878 CSE2YNR010W 450 nt-2.83□□□□□ -2.86
VPS13Q07878 AIM29YKR074W 468 nt-2.85□□□□□ -2.87
VPS13Q07878 FYV7YLR068W 456 nt-2.85□□□□□ -2.87
VPS13Q07878 snR72snR72 98 nt-2.85□□□□□ -2.87
VPS13Q07878 YKL100W-AYKL100W-A 90 nt-2.85□□□□□ -2.87
VPS13Q07878 YNL198CYNL198C 303 nt-2.86□□□□□ -2.87
VPS13Q07878 YNL266WYNL266W 420 nt-2.86□□□□□ -2.87
VPS13Q07878 tQ(UUG)QtQ(UUG)Q 76 nt-2.88□□□□□ -2.87
VPS13Q07878 SMD2YLR275W 333 nt-2.88□□□□□ -2.87
VPS13Q07878 tT(UGU)Q1tT(UGU)Q1 76 nt-2.89□□□□□ -2.87
VPS13Q07878 YDR366CYDR366C 399 nt-2.92□□□□□ -2.88
VPS13Q07878 YAR029WYAR029W 225 nt-2.92□□□□□ -2.88
VPS13Q07878 YML054C-AYML054C-A 159 nt-2.93□□□□□ -2.88
VPS13Q07878 YLR269CYLR269C 351 nt-2.93□□□□□ -2.88
VPS13Q07878 POP7YBR167C 423 nt-2.93□□□□□ -2.88
VPS13Q07878 snR51snR51 107 nt-2.94□□□□□ -2.88
VPS13Q07878 YLR342W-AYLR342W-A 174 nt-2.95□□□□□ -2.88
VPS13Q07878 YBL107W-AYBL107W-A 105 nt-2.95□□□□□ -2.88
Retrieved 100 of 7,029 protein–RNA pairs in 57 ms