Protein–RNA interactions for Protein: Q06688

BER1, SRR1-like protein BER1, yeastyeast

Known RBP Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BER1Q06688 HAL9YOL089C 3093 nt0.41□□□□□ -2.34
BER1Q06688 YIL142C-AYIL142C-A 333 nt0.4□□□□□ -2.35
BER1Q06688 COX5BYIL111W 456 nt0.39□□□□□ -2.35
BER1Q06688 YAR053WYAR053W 297 nt0.39□□□□□ -2.35
BER1Q06688 BEM3YPL115C 3387 nt0.39□□□□□ -2.35
BER1Q06688 YLR399W-AYLR399W-A 105 nt0.38□□□□□ -2.35
BER1Q06688 PET111YMR257C 2403 nt0.37□□□□□ -2.35
BER1Q06688 YDL185C-AYDL185C-A 228 nt0.37□□□□□ -2.35
BER1Q06688 RPL35AYDL191W 363 nt0.37□□□□□ -2.35
BER1Q06688 OST4YDL232W 111 nt0.37□□□□□ -2.35
BER1Q06688 SBH1YER087C-B 249 nt0.37□□□□□ -2.35
BER1Q06688 PAU12YGR294W 363 nt0.37□□□□□ -2.35
BER1Q06688 YAL067W-AYAL067W-A 228 nt0.37□□□□□ -2.35
BER1Q06688 HTB2YBL002W 396 nt0.37□□□□□ -2.35
BER1Q06688 YHR007C-AYHR007C-A 216 nt0.36□□□□□ -2.35
BER1Q06688 tW(UCA)QtW(UCA)Q 74 nt0.36□□□□□ -2.35
BER1Q06688 YAL068W-AYAL068W-A 255 nt0.36□□□□□ -2.35
BER1Q06688 ABF2YMR072W 552 nt0.36□□□□□ -2.35
BER1Q06688 YMR321CYMR321C 318 nt0.35□□□□□ -2.35
BER1Q06688 YOR293C-AYOR293C-A 150 nt0.34□□□□□ -2.36
BER1Q06688 snR190snR190 190 nt0.34□□□□□ -2.36
BER1Q06688 PRP42YDR235W 1635 nt0.34□□□□□ -2.36
BER1Q06688 VIK1YPL253C 1944 nt0.33□□□□□ -2.36
BER1Q06688 SSS1YDR086C 243 nt0.33□□□□□ -2.36
BER1Q06688 YOR192C-BYOR192C-B 5313 nt0.33□□□□□ -2.36
BER1Q06688 YMR307C-AYMR307C-A 195 nt0.31□□□□□ -2.36
BER1Q06688 YMR160WYMR160W 2451 nt0.3□□□□□ -2.36
BER1Q06688 YCR018C-AYCR018C-A 255 nt0.3□□□□□ -2.36
BER1Q06688 Q0144Q0144 330 nt0.3□□□□□ -2.36
BER1Q06688 YLR154W-FYLR154W-F 141 nt0.3□□□□□ -2.36
BER1Q06688 YLR222C-AYLR222C-A 231 nt0.3□□□□□ -2.36
BER1Q06688 MLP1YKR095W 5628 nt0.29□□□□□ -2.36
BER1Q06688 FMP27YLR454W 7887 nt0.29□□□□□ -2.36
BER1Q06688 BIL1YOR304C-A 231 nt0.29□□□□□ -2.36
BER1Q06688 YOR345CYOR345C 351 nt0.29□□□□□ -2.36
BER1Q06688 YIL115W-AYIL115W-A 372 nt0.28□□□□□ -2.36
BER1Q06688 COG8YML071C 1824 nt0.28□□□□□ -2.36
BER1Q06688 YDR048CYDR048C 315 nt0.27□□□□□ -2.37
BER1Q06688 YDR354C-AYDR354C-A 144 nt0.27□□□□□ -2.37
BER1Q06688 YGR035CYGR035C 351 nt0.27□□□□□ -2.37
BER1Q06688 INA22YIR024C 651 nt0.27□□□□□ -2.37
BER1Q06688 tN(GUU)QtN(GUU)Q 71 nt0.26□□□□□ -2.37
BER1Q06688 YAL063C-AYAL063C-A 291 nt0.25□□□□□ -2.37
BER1Q06688 ESP1YGR098C 4893 nt0.24□□□□□ -2.37
BER1Q06688 RPS27BYHR021C 249 nt0.24□□□□□ -2.37
BER1Q06688 YJL026C-AYJL026C-A 222 nt0.24□□□□□ -2.37
BER1Q06688 ULP2YIL031W 3105 nt0.23□□□□□ -2.37
BER1Q06688 UTP20YBL004W 7482 nt0.22□□□□□ -2.37
BER1Q06688 YDR371C-AYDR371C-A 105 nt0.22□□□□□ -2.37
BER1Q06688 IQG1YPL242C 4488 nt0.22□□□□□ -2.37
BER1Q06688 YKL136WYKL136W 399 nt0.21□□□□□ -2.38
BER1Q06688 YLR282CYLR282C 342 nt0.21□□□□□ -2.38
BER1Q06688 NNF2YGR089W 2811 nt0.21□□□□□ -2.38
BER1Q06688 ORC3YLL004W 1851 nt0.2□□□□□ -2.38
BER1Q06688 YCR022CYCR022C 345 nt0.2□□□□□ -2.38
BER1Q06688 ULI1YFR026C 510 nt0.2□□□□□ -2.38
BER1Q06688 RPS26AYGL189C 360 nt0.2□□□□□ -2.38
BER1Q06688 BIR1YJR089W 2865 nt0.2□□□□□ -2.38
BER1Q06688 YOL013W-AYOL013W-A 192 nt0.19□□□□□ -2.38
BER1Q06688 YPR092WYPR092W 306 nt0.19□□□□□ -2.38
BER1Q06688 YDR157WYDR157W 402 nt0.18□□□□□ -2.38
BER1Q06688 VAR1Q0140 1197 nt0.18□□□□□ -2.38
BER1Q06688 CSE2YNR010W 450 nt0.18□□□□□ -2.38
BER1Q06688 YOR029WYOR029W 336 nt0.18□□□□□ -2.38
BER1Q06688 RCO1YMR075W 2055 nt0.18□□□□□ -2.38
BER1Q06688 MLP2YIL149C 5040 nt0.18□□□□□ -2.38
BER1Q06688 COY1YKL179C 2040 nt0.18□□□□□ -2.38
BER1Q06688 YNL146WYNL146W 303 nt0.17□□□□□ -2.38
BER1Q06688 YPR016W-AYPR016W-A 261 nt0.16□□□□□ -2.38
BER1Q06688 NIP1YMR309C 2439 nt0.15□□□□□ -2.39
BER1Q06688 YEL020C-BYEL020C-B 198 nt0.14□□□□□ -2.39
BER1Q06688 YOR161W-AYOR161W-A 81 nt0.14□□□□□ -2.39
BER1Q06688 YNL054W-BYNL054W-B 5250 nt0.13□□□□□ -2.39
BER1Q06688 STE5YDR103W 2754 nt0.12□□□□□ -2.39
BER1Q06688 snR60snR60 104 nt0.12□□□□□ -2.39
BER1Q06688 BUL2YML111W 2763 nt0.12□□□□□ -2.39
BER1Q06688 YGL123C-AYGL123C-A 231 nt0.11□□□□□ -2.39
BER1Q06688 TRS65YGR166W 1683 nt0.11□□□□□ -2.39
BER1Q06688 AI1Q0050 2505 nt0.1□□□□□ -2.39
BER1Q06688 HTL1YCR020W-B 237 nt0.1□□□□□ -2.39
BER1Q06688 YLR041WYLR041W 321 nt0.1□□□□□ -2.39
BER1Q06688 YFL063WYFL063W 456 nt0.09□□□□□ -2.4
BER1Q06688 YJL197C-AYJL197C-A 282 nt0.09□□□□□ -2.4
BER1Q06688 BLI1YKL061W 342 nt0.09□□□□□ -2.4
BER1Q06688 YLL006W-AYLL006W-A 177 nt0.09□□□□□ -2.4
BER1Q06688 YDR118W-AYDR118W-A 117 nt0.08□□□□□ -2.4
BER1Q06688 YHR131W-AYHR131W-A 246 nt0.08□□□□□ -2.4
BER1Q06688 RPS30BYOR182C 192 nt0.08□□□□□ -2.4
BER1Q06688 YBL100W-BYBL100W-B 5313 nt0.07□□□□□ -2.4
BER1Q06688 YDR102CYDR102C 333 nt0.07□□□□□ -2.4
BER1Q06688 YIL032CYIL032C 357 nt0.07□□□□□ -2.4
BER1Q06688 YKL145W-AYKL145W-A 93 nt0.07□□□□□ -2.4
BER1Q06688 YLL019W-AYLL019W-A 93 nt0.07□□□□□ -2.4
BER1Q06688 YKL100W-AYKL100W-A 90 nt0.06□□□□□ -2.4
BER1Q06688 YAF9YNL107W 681 nt0.06□□□□□ -2.4
BER1Q06688 COX12YLR038C 252 nt0.05□□□□□ -2.4
BER1Q06688 YOR186C-AYOR186C-A 210 nt0.05□□□□□ -2.4
BER1Q06688 MYO1YHR023W 5787 nt0.04□□□□□ -2.4
BER1Q06688 YGR069WYGR069W 336 nt0.04□□□□□ -2.4
BER1Q06688 SNU13YEL026W 381 nt0.03□□□□□ -2.4
Retrieved 100 of 7,029 protein–RNA pairs in 29.2 ms