Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.78■□□□□ 0.76
SRP54P61011 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SRP54P61011 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SRP54P61011 FP700111.2-201ENST00000619190 1892 ntBASIC19.77■□□□□ 0.76
SRP54P61011 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.76
SRP54P61011 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SRP54P61011 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.77■□□□□ 0.76
SRP54P61011 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
SRP54P61011 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.77■□□□□ 0.76
SRP54P61011 AC133681.1-201ENST00000465482 601 ntBASIC19.77■□□□□ 0.76
SRP54P61011 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.77■□□□□ 0.76
SRP54P61011 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.77■□□□□ 0.76
SRP54P61011 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.77■□□□□ 0.76
SRP54P61011 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SRP54P61011 AC006128.1-201ENST00000624704 1661 ntBASIC19.77■□□□□ 0.76
SRP54P61011 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.76■□□□□ 0.75
SRP54P61011 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SRP54P61011 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SRP54P61011 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.76■□□□□ 0.75
SRP54P61011 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SRP54P61011 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SRP54P61011 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SRP54P61011 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.76■□□□□ 0.75
SRP54P61011 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.76■□□□□ 0.75
SRP54P61011 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.76■□□□□ 0.75
SRP54P61011 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SRP54P61011 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SRP54P61011 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SRP54P61011 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SRP54P61011 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SRP54P61011 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SRP54P61011 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SRP54P61011 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SRP54P61011 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SRP54P61011 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SRP54P61011 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.75■□□□□ 0.75
SRP54P61011 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SRP54P61011 KRASP1-201ENST00000407852 552 ntBASIC19.75■□□□□ 0.75
SRP54P61011 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SRP54P61011 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.75■□□□□ 0.75
SRP54P61011 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.75■□□□□ 0.75
SRP54P61011 PRKY-204ENST00000533551 1019 ntBASIC19.75■□□□□ 0.75
SRP54P61011 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.75■□□□□ 0.75
SRP54P61011 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.75■□□□□ 0.75
SRP54P61011 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.75■□□□□ 0.75
SRP54P61011 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SRP54P61011 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SRP54P61011 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.75■□□□□ 0.75
SRP54P61011 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SRP54P61011 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SRP54P61011 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SRP54P61011 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SRP54P61011 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
SRP54P61011 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SRP54P61011 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SRP54P61011 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SRP54P61011 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SRP54P61011 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SRP54P61011 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.74■□□□□ 0.75
SRP54P61011 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.74■□□□□ 0.75
SRP54P61011 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SRP54P61011 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.74■□□□□ 0.75
SRP54P61011 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SRP54P61011 HLA-G-202ENST00000376815 851 ntBASIC19.74■□□□□ 0.75
SRP54P61011 HLA-G-203ENST00000376818 1127 ntBASIC19.74■□□□□ 0.75
SRP54P61011 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
SRP54P61011 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.74■□□□□ 0.75
SRP54P61011 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SRP54P61011 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SRP54P61011 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.74■□□□□ 0.75
SRP54P61011 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SRP54P61011 Z99916.2-201ENST00000604037 246 ntBASIC19.74■□□□□ 0.75
SRP54P61011 AC110285.5-201ENST00000611501 352 ntBASIC19.74■□□□□ 0.75
SRP54P61011 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.74■□□□□ 0.75
SRP54P61011 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SRP54P61011 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.74■□□□□ 0.75
SRP54P61011 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SRP54P61011 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SRP54P61011 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SRP54P61011 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SRP54P61011 PTBP1P-201ENST00000554374 1601 ntBASIC19.73■□□□□ 0.75
SRP54P61011 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SRP54P61011 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SRP54P61011 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
SRP54P61011 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.73■□□□□ 0.75
SRP54P61011 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.73■□□□□ 0.75
SRP54P61011 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SRP54P61011 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
SRP54P61011 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SRP54P61011 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.73■□□□□ 0.75
SRP54P61011 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.73■□□□□ 0.75
SRP54P61011 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SRP54P61011 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.73■□□□□ 0.75
SRP54P61011 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SRP54P61011 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SRP54P61011 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SRP54P61011 AC124283.5-201ENST00000624661 1809 ntBASIC19.72■□□□□ 0.75
SRP54P61011 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.72■□□□□ 0.75
SRP54P61011 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SRP54P61011 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms