Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC23.06■■□□□ 1.28
TM4SF4P48230 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.06■■□□□ 1.28
TM4SF4P48230 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC23.06■■□□□ 1.28
TM4SF4P48230 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
TM4SF4P48230 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
TM4SF4P48230 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC23.06■■□□□ 1.28
TM4SF4P48230 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC23.06■■□□□ 1.28
TM4SF4P48230 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
TM4SF4P48230 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
TM4SF4P48230 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
TM4SF4P48230 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TM4SF4P48230 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TM4SF4P48230 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
TM4SF4P48230 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23.05■■□□□ 1.28
TM4SF4P48230 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TM4SF4P48230 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC23.05■■□□□ 1.28
TM4SF4P48230 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC23.05■■□□□ 1.28
TM4SF4P48230 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.05■■□□□ 1.28
TM4SF4P48230 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TM4SF4P48230 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
TM4SF4P48230 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TM4SF4P48230 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
TM4SF4P48230 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
TM4SF4P48230 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
TM4SF4P48230 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC23.05■■□□□ 1.28
TM4SF4P48230 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC23.05■■□□□ 1.28
TM4SF4P48230 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TM4SF4P48230 AP000692.2-201ENST00000608391 879 ntBASIC23.05■■□□□ 1.28
TM4SF4P48230 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC23.05■■□□□ 1.28
TM4SF4P48230 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC23.05■■□□□ 1.28
TM4SF4P48230 AC116562.4-202ENST00000641738 218 ntBASIC23.05■■□□□ 1.28
TM4SF4P48230 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC23.04■■□□□ 1.28
TM4SF4P48230 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
TM4SF4P48230 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TM4SF4P48230 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
TM4SF4P48230 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC23.04■■□□□ 1.28
TM4SF4P48230 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC23.04■■□□□ 1.28
TM4SF4P48230 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
TM4SF4P48230 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TM4SF4P48230 BET1L-202ENST00000332865 533 ntTSL 5 BASIC23.04■■□□□ 1.28
TM4SF4P48230 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
TM4SF4P48230 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
TM4SF4P48230 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC23.04■■□□□ 1.28
TM4SF4P48230 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TM4SF4P48230 SLC25A1P4-201ENST00000567977 778 ntBASIC23.04■■□□□ 1.28
TM4SF4P48230 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TM4SF4P48230 AC011558.1-201ENST00000623459 338 ntBASIC23.04■■□□□ 1.28
TM4SF4P48230 AC131212.4-201ENST00000623606 975 ntBASIC23.04■■□□□ 1.28
TM4SF4P48230 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC23.04■■□□□ 1.28
TM4SF4P48230 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TM4SF4P48230 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TM4SF4P48230 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
TM4SF4P48230 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
TM4SF4P48230 PTBP1P-201ENST00000554374 1601 ntBASIC23.04■■□□□ 1.28
TM4SF4P48230 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.04■■□□□ 1.28
TM4SF4P48230 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
TM4SF4P48230 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TM4SF4P48230 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC23.03■■□□□ 1.28
TM4SF4P48230 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TM4SF4P48230 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TM4SF4P48230 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TM4SF4P48230 HIST1H2APS4-201ENST00000362070 348 ntBASIC23.03■■□□□ 1.28
TM4SF4P48230 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC23.03■■□□□ 1.28
TM4SF4P48230 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TM4SF4P48230 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
TM4SF4P48230 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC23.03■■□□□ 1.28
TM4SF4P48230 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC23.03■■□□□ 1.28
TM4SF4P48230 AC093458.2-201ENST00000623150 629 ntBASIC23.03■■□□□ 1.28
TM4SF4P48230 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
TM4SF4P48230 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.03■■□□□ 1.28
TM4SF4P48230 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC23.03■■□□□ 1.28
TM4SF4P48230 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TM4SF4P48230 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TM4SF4P48230 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
TM4SF4P48230 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TM4SF4P48230 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
TM4SF4P48230 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TM4SF4P48230 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
TM4SF4P48230 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC23.02■■□□□ 1.28
TM4SF4P48230 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TM4SF4P48230 CALM3-202ENST00000391918 702 ntTSL 2 BASIC23.02■■□□□ 1.28
TM4SF4P48230 CD70-202ENST00000423145 881 ntTSL 2 BASIC23.02■■□□□ 1.28
TM4SF4P48230 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TM4SF4P48230 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TM4SF4P48230 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TM4SF4P48230 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC23.02■■□□□ 1.28
TM4SF4P48230 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.02■■□□□ 1.28
TM4SF4P48230 STAC-204ENST00000457375 1366 ntTSL 2 BASIC23.01■■□□□ 1.27
TM4SF4P48230 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TM4SF4P48230 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
TM4SF4P48230 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC23.01■■□□□ 1.27
TM4SF4P48230 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC23.01■■□□□ 1.27
TM4SF4P48230 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TM4SF4P48230 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC23.01■■□□□ 1.27
TM4SF4P48230 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC23.01■■□□□ 1.27
TM4SF4P48230 CCR12P-201ENST00000446203 998 ntBASIC23.01■■□□□ 1.27
TM4SF4P48230 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC23.01■■□□□ 1.27
TM4SF4P48230 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC23.01■■□□□ 1.27
TM4SF4P48230 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC23.01■■□□□ 1.27
TM4SF4P48230 NDUFV2-AS1-203ENST00000608008 779 ntBASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms