Protein–RNA interactions for Protein: P38931

SSN2, Mediator of RNA polymerase II transcription subunit 13, yeastyeast

Predictions only

Length 1,420 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN2P38931 snR5snR5 204 nt-0.81□□□□□ -2.54
SSN2P38931 YGR115CYGR115C 780 nt-0.82□□□□□ -2.54
SSN2P38931 RPF1YHR088W 888 nt-0.82□□□□□ -2.54
SSN2P38931 YLR287CYLR287C 1068 nt-0.82□□□□□ -2.54
SSN2P38931 YPL182CYPL182C 384 nt-0.82□□□□□ -2.54
SSN2P38931 YCR018C-AYCR018C-A 255 nt-0.83□□□□□ -2.54
SSN2P38931 HUR1YGL168W 333 nt-0.83□□□□□ -2.54
SSN2P38931 BER1YLR412W 825 nt-0.84□□□□□ -2.54
SSN2P38931 YOR011W-AYOR011W-A 207 nt-0.84□□□□□ -2.54
SSN2P38931 snR161snR161 161 nt-0.84□□□□□ -2.54
SSN2P38931 SDH7YDR511W 402 nt-0.85□□□□□ -2.55
SSN2P38931 YJL120WYJL120W 324 nt-0.87□□□□□ -2.55
SSN2P38931 PCF11YDR228C 1881 nt-0.88□□□□□ -2.55
SSN2P38931 YCR001WYCR001W 315 nt-0.88□□□□□ -2.55
SSN2P38931 YGL230CYGL230C 444 nt-0.88□□□□□ -2.55
SSN2P38931 YBR099CYBR099C 384 nt-0.88□□□□□ -2.55
SSN2P38931 POP7YBR167C 423 nt-0.88□□□□□ -2.55
SSN2P38931 CMC1YKL137W 336 nt-0.89□□□□□ -2.55
SSN2P38931 TAR1YLR154W-C 375 nt-0.89□□□□□ -2.55
SSN2P38931 SGF11YPL047W 300 nt-0.89□□□□□ -2.55
SSN2P38931 YPT6YLR262C 648 nt-0.89□□□□□ -2.55
SSN2P38931 MRPS8YMR158W 468 nt-0.9□□□□□ -2.55
SSN2P38931 snR9snR9 187 nt-0.91□□□□□ -2.56
SSN2P38931 SCEIQ0160 708 nt-0.91□□□□□ -2.56
SSN2P38931 YPR092WYPR092W 306 nt-0.91□□□□□ -2.56
SSN2P38931 snR36snR36 182 nt-0.91□□□□□ -2.56
SSN2P38931 EST1YLR233C 2100 nt-0.93□□□□□ -2.56
SSN2P38931 YGR025WYGR025W 303 nt-0.93□□□□□ -2.56
SSN2P38931 YIL071W-AYIL071W-A 477 nt-0.93□□□□□ -2.56
SSN2P38931 YDL007C-AYDL007C-A 258 nt-0.94□□□□□ -2.56
SSN2P38931 YER175W-AYER175W-A 165 nt-0.94□□□□□ -2.56
SSN2P38931 YHR138CYHR138C 345 nt-0.95□□□□□ -2.56
SSN2P38931 YNL058CYNL058C 951 nt-0.95□□□□□ -2.56
SSN2P38931 HMLALPHA2YCL067C 633 nt-0.96□□□□□ -2.56
SSN2P38931 MATALPHA2YCR039C 633 nt-0.96□□□□□ -2.56
SSN2P38931 HMRA2YCR096C 360 nt-0.96□□□□□ -2.56
SSN2P38931 YLR282CYLR282C 342 nt-0.96□□□□□ -2.56
SSN2P38931 YBL062WYBL062W 381 nt-0.96□□□□□ -2.56
SSN2P38931 ZEO1YOL109W 342 nt-0.97□□□□□ -2.56
SSN2P38931 YMR158W-BYMR158W-B 321 nt-0.98□□□□□ -2.57
SSN2P38931 YLR041WYLR041W 321 nt-0.98□□□□□ -2.57
SSN2P38931 tA(UGC)QtA(UGC)Q 76 nt-0.99□□□□□ -2.57
SSN2P38931 YHL041WYHL041W 450 nt-0.99□□□□□ -2.57
SSN2P38931 BLI1YKL061W 342 nt-0.99□□□□□ -2.57
SSN2P38931 FYV7YLR068W 456 nt-0.99□□□□□ -2.57
SSN2P38931 YMR254CYMR254C 309 nt-0.99□□□□□ -2.57
SSN2P38931 MND1YGL183C 660 nt-1□□□□□ -2.57
SSN2P38931 YCR100CYCR100C 951 nt-1.01□□□□□ -2.57
SSN2P38931 YJL020W-AYJL020W-A 258 nt-1.01□□□□□ -2.57
SSN2P38931 GRX5YPL059W 453 nt-1.01□□□□□ -2.57
SSN2P38931 TSC3YBR058C-A 243 nt-1.01□□□□□ -2.57
SSN2P38931 SNU13YEL026W 381 nt-1.02□□□□□ -2.57
SSN2P38931 YML007C-AYML007C-A 111 nt-1.02□□□□□ -2.57
SSN2P38931 YDL011CYDL011C 324 nt-1.03□□□□□ -2.57
SSN2P38931 RPS25BYLR333C 327 nt-1.03□□□□□ -2.57
SSN2P38931 YBR072C-AYBR072C-A 162 nt-1.03□□□□□ -2.57
SSN2P38931 YPR002C-AYPR002C-A 198 nt-1.04□□□□□ -2.58
SSN2P38931 YLR334CYLR334C 381 nt-1.05□□□□□ -2.58
SSN2P38931 YER079WYER079W 633 nt-1.06□□□□□ -2.58
SSN2P38931 YKL044WYKL044W 321 nt-1.06□□□□□ -2.58
SSN2P38931 AGA2YGL032C 264 nt-1.07□□□□□ -2.58
SSN2P38931 YIL029CYIL029C 429 nt-1.07□□□□□ -2.58
SSN2P38931 YIR021W-AYIR021W-A 213 nt-1.07□□□□□ -2.58
SSN2P38931 YDR366CYDR366C 399 nt-1.08□□□□□ -2.58
SSN2P38931 YLR412C-AYLR412C-A 207 nt-1.08□□□□□ -2.58
SSN2P38931 YPL229WYPL229W 621 nt-1.08□□□□□ -2.58
SSN2P38931 YJR087WYJR087W 351 nt-1.1□□□□□ -2.59
SSN2P38931 YNL303WYNL303W 348 nt-1.1□□□□□ -2.59
SSN2P38931 PAU9YBL108C-A 129 nt-1.12□□□□□ -2.59
SSN2P38931 YBL071CYBL071C 309 nt-1.13□□□□□ -2.59
SSN2P38931 YOR161W-AYOR161W-A 81 nt-1.13□□□□□ -2.59
SSN2P38931 YDL016CYDL016C 303 nt-1.14□□□□□ -2.59
SSN2P38931 YDR354C-AYDR354C-A 144 nt-1.14□□□□□ -2.59
SSN2P38931 YDR426CYDR426C 378 nt-1.15□□□□□ -2.59
SSN2P38931 YHR007C-AYHR007C-A 216 nt-1.15□□□□□ -2.59
SSN2P38931 YML100W-AYML100W-A 174 nt-1.15□□□□□ -2.59
SSN2P38931 YPL068CYPL068C 882 nt-1.15□□□□□ -2.59
SSN2P38931 YGL123C-AYGL123C-A 231 nt-1.17□□□□□ -2.6
SSN2P38931 YKL083WYKL083W 615 nt-1.18□□□□□ -2.6
SSN2P38931 YLR264C-AYLR264C-A 117 nt-1.18□□□□□ -2.6
SSN2P38931 YLR154W-FYLR154W-F 141 nt-1.19□□□□□ -2.6
SSN2P38931 YOR015WYOR015W 360 nt-1.19□□□□□ -2.6
SSN2P38931 YKL100W-AYKL100W-A 90 nt-1.2□□□□□ -2.6
SSN2P38931 YAR029WYAR029W 225 nt-1.21□□□□□ -2.6
SSN2P38931 AIM29YKR074W 468 nt-1.22□□□□□ -2.6
SSN2P38931 SDH6YDR379C-A 240 nt-1.23□□□□□ -2.61
SSN2P38931 tP(UGG)QtP(UGG)Q 72 nt-1.24□□□□□ -2.61
SSN2P38931 YHR130CYHR130C 336 nt-1.24□□□□□ -2.61
SSN2P38931 YIL002W-AYIL002W-A 210 nt-1.24□□□□□ -2.61
SSN2P38931 YJL182CYJL182C 318 nt-1.24□□□□□ -2.61
SSN2P38931 YOR192C-CYOR192C-C 237 nt-1.26□□□□□ -2.61
SSN2P38931 YEL020C-BYEL020C-B 198 nt-1.27□□□□□ -2.61
SSN2P38931 YER084W-AYER084W-A 513 nt-1.28□□□□□ -2.61
SSN2P38931 YGR174W-AYGR174W-A 87 nt-1.28□□□□□ -2.61
SSN2P38931 PCC1YKR095W-A 267 nt-1.28□□□□□ -2.61
SSN2P38931 YGL182CYGL182C 324 nt-1.29□□□□□ -2.62
SSN2P38931 YLR456WYLR456W 615 nt-1.3□□□□□ -2.62
SSN2P38931 YFL012WYFL012W 447 nt-1.31□□□□□ -2.62
SSN2P38931 YLR269CYLR269C 351 nt-1.31□□□□□ -2.62
SSN2P38931 YOL166W-AYOL166W-A 156 nt-1.32□□□□□ -2.62
Retrieved 100 of 7,029 protein–RNA pairs in 44.1 ms