Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.25■□□□□ 0.67
CAPN3P20807 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN3P20807 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN3P20807 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN3P20807 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN3P20807 TREX1-205ENST00000625293 1783 ntBASIC19.24■□□□□ 0.67
CAPN3P20807 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN3P20807 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN3P20807 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN3P20807 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN3P20807 AC005332.7-201ENST00000614046 2005 ntBASIC19.24■□□□□ 0.67
CAPN3P20807 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN3P20807 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CAPN3P20807 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.24■□□□□ 0.67
CAPN3P20807 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.24■□□□□ 0.67
CAPN3P20807 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CAPN3P20807 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.24■□□□□ 0.67
CAPN3P20807 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.24■□□□□ 0.67
CAPN3P20807 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.24■□□□□ 0.67
CAPN3P20807 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.24■□□□□ 0.67
CAPN3P20807 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.24■□□□□ 0.67
CAPN3P20807 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN3P20807 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN3P20807 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.24■□□□□ 0.67
CAPN3P20807 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.24■□□□□ 0.67
CAPN3P20807 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN3P20807 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN3P20807 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN3P20807 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.24■□□□□ 0.67
CAPN3P20807 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.23■□□□□ 0.67
CAPN3P20807 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN3P20807 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.23■□□□□ 0.67
CAPN3P20807 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN3P20807 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN3P20807 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN3P20807 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN3P20807 CD99P1-205ENST00000527459 561 ntBASIC19.23■□□□□ 0.67
CAPN3P20807 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.23■□□□□ 0.67
CAPN3P20807 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.23■□□□□ 0.67
CAPN3P20807 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
CAPN3P20807 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.23■□□□□ 0.67
CAPN3P20807 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN3P20807 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.23■□□□□ 0.67
CAPN3P20807 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.23■□□□□ 0.67
CAPN3P20807 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN3P20807 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN3P20807 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN3P20807 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.22■□□□□ 0.67
CAPN3P20807 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CAPN3P20807 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN3P20807 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN3P20807 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.22■□□□□ 0.67
CAPN3P20807 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN3P20807 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN3P20807 NCF1B-203ENST00000435988 1254 ntBASIC19.22■□□□□ 0.67
CAPN3P20807 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN3P20807 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN3P20807 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN3P20807 RBM17P2-201ENST00000616397 1405 ntBASIC19.22■□□□□ 0.67
CAPN3P20807 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN3P20807 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CAPN3P20807 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN3P20807 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN3P20807 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN3P20807 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN3P20807 AC093484.2-201ENST00000580996 2166 ntBASIC19.22■□□□□ 0.67
CAPN3P20807 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN3P20807 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN3P20807 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.21■□□□□ 0.67
CAPN3P20807 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN3P20807 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN3P20807 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN3P20807 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN3P20807 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN3P20807 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN3P20807 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.21■□□□□ 0.67
CAPN3P20807 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.21■□□□□ 0.67
CAPN3P20807 AC007322.3-201ENST00000426526 701 ntBASIC19.21■□□□□ 0.67
CAPN3P20807 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CAPN3P20807 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.21■□□□□ 0.67
CAPN3P20807 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.21■□□□□ 0.67
CAPN3P20807 AC243732.1-201ENST00000612648 864 ntBASIC19.21■□□□□ 0.67
CAPN3P20807 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN3P20807 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN3P20807 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN3P20807 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.21■□□□□ 0.67
CAPN3P20807 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN3P20807 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.2■□□□□ 0.66
CAPN3P20807 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN3P20807 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN3P20807 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN3P20807 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CAPN3P20807 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.2■□□□□ 0.66
CAPN3P20807 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.2■□□□□ 0.66
CAPN3P20807 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.2■□□□□ 0.66
CAPN3P20807 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.2■□□□□ 0.66
CAPN3P20807 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.2■□□□□ 0.66
CAPN3P20807 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.2■□□□□ 0.66
CAPN3P20807 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CAPN3P20807 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms