Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.22■□□□□ 0.83
HLA-DPA1P20036 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DPA1P20036 KRT8P20-201ENST00000423953 1409 ntBASIC20.22■□□□□ 0.83
HLA-DPA1P20036 KRT8P17-201ENST00000453110 1448 ntBASIC20.22■□□□□ 0.83
HLA-DPA1P20036 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DPA1P20036 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DPA1P20036 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DPA1P20036 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
HLA-DPA1P20036 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.22■□□□□ 0.83
HLA-DPA1P20036 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
HLA-DPA1P20036 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DPA1P20036 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.22■□□□□ 0.83
HLA-DPA1P20036 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.22■□□□□ 0.83
HLA-DPA1P20036 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DPA1P20036 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.22■□□□□ 0.83
HLA-DPA1P20036 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.22■□□□□ 0.83
HLA-DPA1P20036 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.22■□□□□ 0.83
HLA-DPA1P20036 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
HLA-DPA1P20036 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
HLA-DPA1P20036 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DPA1P20036 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.22■□□□□ 0.83
HLA-DPA1P20036 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DPA1P20036 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DPA1P20036 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
HLA-DPA1P20036 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DPA1P20036 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
HLA-DPA1P20036 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.22■□□□□ 0.83
HLA-DPA1P20036 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.21■□□□□ 0.83
HLA-DPA1P20036 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DPA1P20036 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DPA1P20036 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DPA1P20036 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DPA1P20036 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DPA1P20036 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.21■□□□□ 0.83
HLA-DPA1P20036 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
HLA-DPA1P20036 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
HLA-DPA1P20036 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.21■□□□□ 0.83
HLA-DPA1P20036 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.21■□□□□ 0.83
HLA-DPA1P20036 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.21■□□□□ 0.83
HLA-DPA1P20036 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.21■□□□□ 0.83
HLA-DPA1P20036 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.21■□□□□ 0.83
HLA-DPA1P20036 AC091874.3-201ENST00000512672 1195 ntBASIC20.21■□□□□ 0.83
HLA-DPA1P20036 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.21■□□□□ 0.83
HLA-DPA1P20036 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.21■□□□□ 0.83
HLA-DPA1P20036 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.21■□□□□ 0.83
HLA-DPA1P20036 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.21■□□□□ 0.83
HLA-DPA1P20036 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DPA1P20036 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DPA1P20036 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DPA1P20036 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
HLA-DPA1P20036 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DPA1P20036 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
HLA-DPA1P20036 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
HLA-DPA1P20036 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-DPA1P20036 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
HLA-DPA1P20036 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-DPA1P20036 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.2■□□□□ 0.82
HLA-DPA1P20036 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.2■□□□□ 0.82
HLA-DPA1P20036 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-DPA1P20036 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-DPA1P20036 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.2■□□□□ 0.82
HLA-DPA1P20036 HLA-G-202ENST00000376815 851 ntBASIC20.2■□□□□ 0.82
HLA-DPA1P20036 HLA-G-203ENST00000376818 1127 ntBASIC20.2■□□□□ 0.82
HLA-DPA1P20036 HLA-L-209ENST00000420110 1011 ntBASIC20.2■□□□□ 0.82
HLA-DPA1P20036 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-DPA1P20036 AC104771.1-201ENST00000603335 964 ntBASIC20.2■□□□□ 0.82
HLA-DPA1P20036 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.2■□□□□ 0.82
HLA-DPA1P20036 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.2■□□□□ 0.82
HLA-DPA1P20036 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-DPA1P20036 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
HLA-DPA1P20036 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.2■□□□□ 0.82
HLA-DPA1P20036 AL391422.3-201ENST00000603791 2761 ntBASIC20.2■□□□□ 0.82
HLA-DPA1P20036 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-DPA1P20036 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.2■□□□□ 0.82
HLA-DPA1P20036 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-DPA1P20036 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.19■□□□□ 0.82
HLA-DPA1P20036 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-DPA1P20036 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-DPA1P20036 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-DPA1P20036 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-DPA1P20036 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-DPA1P20036 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-DPA1P20036 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-DPA1P20036 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
HLA-DPA1P20036 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.19■□□□□ 0.82
HLA-DPA1P20036 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.19■□□□□ 0.82
HLA-DPA1P20036 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
HLA-DPA1P20036 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.19■□□□□ 0.82
HLA-DPA1P20036 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
HLA-DPA1P20036 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.19■□□□□ 0.82
HLA-DPA1P20036 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
HLA-DPA1P20036 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-DPA1P20036 TCF3P1-201ENST00000423021 1937 ntBASIC20.18■□□□□ 0.82
HLA-DPA1P20036 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
HLA-DPA1P20036 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-DPA1P20036 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.18■□□□□ 0.82
HLA-DPA1P20036 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-DPA1P20036 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.18■□□□□ 0.82
HLA-DPA1P20036 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-DPA1P20036 AC073210.2-201ENST00000430369 194 ntBASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms