Protein–RNA interactions for Protein: P0C0X0

RPS28B, 40S ribosomal protein S28-B, yeastyeast

Known RBP Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPS28BP0C0X0 YFR009W-AYFR009W-A 258 nt-0.5□□□□□ -2.49
RPS28BP0C0X0 snR46snR46 197 nt-0.5□□□□□ -2.49
RPS28BP0C0X0 YJL047C-AYJL047C-A 135 nt-0.51□□□□□ -2.49
RPS28BP0C0X0 YNL319WYNL319W 441 nt-0.51□□□□□ -2.49
RPS28BP0C0X0 FYV7YLR068W 456 nt-0.52□□□□□ -2.49
RPS28BP0C0X0 YCR022CYCR022C 345 nt-0.53□□□□□ -2.49
RPS28BP0C0X0 TAR1YLR154W-C 375 nt-0.53□□□□□ -2.49
RPS28BP0C0X0 URB1YKL014C 5295 nt-0.54□□□□□ -2.5
RPS28BP0C0X0 YBL071CYBL071C 309 nt-0.54□□□□□ -2.5
RPS28BP0C0X0 YOR011W-AYOR011W-A 207 nt-0.54□□□□□ -2.5
RPS28BP0C0X0 YPL225WYPL225W 441 nt-0.54□□□□□ -2.5
RPS28BP0C0X0 HMRA2YCR096C 360 nt-0.55□□□□□ -2.5
RPS28BP0C0X0 YJL007CYJL007C 315 nt-0.55□□□□□ -2.5
RPS28BP0C0X0 YCR018C-AYCR018C-A 255 nt-0.56□□□□□ -2.5
RPS28BP0C0X0 YHL041WYHL041W 450 nt-0.56□□□□□ -2.5
RPS28BP0C0X0 YIR030W-AYIR030W-A 384 nt-0.56□□□□□ -2.5
RPS28BP0C0X0 DIE2YGR227W 1578 nt-0.57□□□□□ -2.5
RPS28BP0C0X0 PRP39YML046W 1890 nt-0.58□□□□□ -2.5
RPS28BP0C0X0 YLL006W-AYLL006W-A 177 nt-0.58□□□□□ -2.5
RPS28BP0C0X0 YLR269CYLR269C 351 nt-0.58□□□□□ -2.5
RPS28BP0C0X0 YPR002C-AYPR002C-A 198 nt-0.58□□□□□ -2.5
RPS28BP0C0X0 ZEO1YOL109W 342 nt-0.59□□□□□ -2.5
RPS28BP0C0X0 HTB2YBL002W 396 nt-0.6□□□□□ -2.51
RPS28BP0C0X0 YML007C-AYML007C-A 111 nt-0.6□□□□□ -2.51
RPS28BP0C0X0 SGF11YPL047W 300 nt-0.6□□□□□ -2.51
RPS28BP0C0X0 Q0255Q0255 1419 nt-0.62□□□□□ -2.51
RPS28BP0C0X0 YKL083WYKL083W 615 nt-0.63□□□□□ -2.51
RPS28BP0C0X0 YLR287CYLR287C 1068 nt-0.63□□□□□ -2.51
RPS28BP0C0X0 YPR170W-AYPR170W-A 186 nt-0.63□□□□□ -2.51
RPS28BP0C0X0 ECL1YGR146C 636 nt-0.65□□□□□ -2.51
RPS28BP0C0X0 YJL120WYJL120W 324 nt-0.65□□□□□ -2.51
RPS28BP0C0X0 YNL303WYNL303W 348 nt-0.65□□□□□ -2.51
RPS28BP0C0X0 RPM2YML091C 3609 nt-0.65□□□□□ -2.51
RPS28BP0C0X0 CSE1YGL238W 2883 nt-0.65□□□□□ -2.51
RPS28BP0C0X0 YHR125WYHR125W 306 nt-0.66□□□□□ -2.52
RPS28BP0C0X0 YPL205CYPL205C 345 nt-0.66□□□□□ -2.52
RPS28BP0C0X0 UTP8YGR128C 2142 nt-0.67□□□□□ -2.52
RPS28BP0C0X0 RPS25BYLR333C 327 nt-0.67□□□□□ -2.52
RPS28BP0C0X0 YLR334CYLR334C 381 nt-0.67□□□□□ -2.52
RPS28BP0C0X0 YPR092WYPR092W 306 nt-0.68□□□□□ -2.52
RPS28BP0C0X0 YJL113WYJL113W 4647 nt-0.68□□□□□ -2.52
RPS28BP0C0X0 YDR426CYDR426C 378 nt-0.69□□□□□ -2.52
RPS28BP0C0X0 YLR282CYLR282C 342 nt-0.7□□□□□ -2.52
RPS28BP0C0X0 GPI15YNL038W 690 nt-0.7□□□□□ -2.52
RPS28BP0C0X0 YLR285C-AYLR285C-A 171 nt-0.71□□□□□ -2.52
RPS28BP0C0X0 YNL067W-BYNL067W-B 141 nt-0.71□□□□□ -2.52
RPS28BP0C0X0 YGR174W-AYGR174W-A 87 nt-0.72□□□□□ -2.52
RPS28BP0C0X0 YHL009W-BYHL009W-B 5409 nt-0.73□□□□□ -2.53
RPS28BP0C0X0 tT(UGU)G1tT(UGU)G1 72 nt-0.73□□□□□ -2.53
RPS28BP0C0X0 tT(UGU)G2tT(UGU)G2 72 nt-0.73□□□□□ -2.53
RPS28BP0C0X0 tT(UGU)PtT(UGU)P 72 nt-0.73□□□□□ -2.53
RPS28BP0C0X0 YLR456WYLR456W 615 nt-0.73□□□□□ -2.53
RPS28BP0C0X0 PCC1YKR095W-A 267 nt-0.74□□□□□ -2.53
RPS28BP0C0X0 snR33snR33 183 nt-0.74□□□□□ -2.53
RPS28BP0C0X0 YDL032WYDL032W 312 nt-0.75□□□□□ -2.53
RPS28BP0C0X0 YPL068CYPL068C 882 nt-0.75□□□□□ -2.53
RPS28BP0C0X0 STF2YGR008C 255 nt-0.76□□□□□ -2.53
RPS28BP0C0X0 ISF1YMR081C 1017 nt-0.76□□□□□ -2.53
RPS28BP0C0X0 YOR192C-CYOR192C-C 237 nt-0.76□□□□□ -2.53
RPS28BP0C0X0 YLR041WYLR041W 321 nt-0.77□□□□□ -2.53
RPS28BP0C0X0 YBR099CYBR099C 384 nt-0.77□□□□□ -2.53
RPS28BP0C0X0 YER084W-AYER084W-A 513 nt-0.78□□□□□ -2.53
RPS28BP0C0X0 YHR138CYHR138C 345 nt-0.78□□□□□ -2.53
RPS28BP0C0X0 YAR047CYAR047C 321 nt-0.78□□□□□ -2.53
RPS28BP0C0X0 SNU13YEL026W 381 nt-0.8□□□□□ -2.54
RPS28BP0C0X0 YJL026C-AYJL026C-A 222 nt-0.8□□□□□ -2.54
RPS28BP0C0X0 PCF11YDR228C 1881 nt-0.8□□□□□ -2.54
RPS28BP0C0X0 EAF6YJR082C 342 nt-0.81□□□□□ -2.54
RPS28BP0C0X0 CBS1YDL069C 690 nt-0.82□□□□□ -2.54
RPS28BP0C0X0 BLI1YKL061W 342 nt-0.82□□□□□ -2.54
RPS28BP0C0X0 YHR007C-AYHR007C-A 216 nt-0.83□□□□□ -2.54
RPS28BP0C0X0 YDL007C-AYDL007C-A 258 nt-0.85□□□□□ -2.55
RPS28BP0C0X0 AIM29YKR074W 468 nt-0.85□□□□□ -2.55
RPS28BP0C0X0 YAR029WYAR029W 225 nt-0.85□□□□□ -2.55
RPS28BP0C0X0 HUG1YML058W-A 207 nt-0.85□□□□□ -2.55
RPS28BP0C0X0 YBR072C-AYBR072C-A 162 nt-0.85□□□□□ -2.55
RPS28BP0C0X0 YDR354C-AYDR354C-A 144 nt-0.87□□□□□ -2.55
RPS28BP0C0X0 QCR9YGR183C 201 nt-0.87□□□□□ -2.55
RPS28BP0C0X0 YMR158W-BYMR158W-B 321 nt-0.87□□□□□ -2.55
RPS28BP0C0X0 YIL071W-AYIL071W-A 477 nt-0.88□□□□□ -2.55
RPS28BP0C0X0 YHR130CYHR130C 336 nt-0.9□□□□□ -2.55
RPS28BP0C0X0 EST1YLR233C 2100 nt-0.9□□□□□ -2.55
RPS28BP0C0X0 YOR161W-AYOR161W-A 81 nt-0.9□□□□□ -2.55
RPS28BP0C0X0 snR161snR161 161 nt-0.9□□□□□ -2.55
RPS28BP0C0X0 YKL100W-AYKL100W-A 90 nt-0.91□□□□□ -2.56
RPS28BP0C0X0 snR54snR54 86 nt-0.91□□□□□ -2.56
RPS28BP0C0X0 YDR366CYDR366C 399 nt-0.92□□□□□ -2.56
RPS28BP0C0X0 YEL020C-BYEL020C-B 198 nt-0.92□□□□□ -2.56
RPS28BP0C0X0 COG6YNL041C 2520 nt-0.92□□□□□ -2.56
RPS28BP0C0X0 snR36snR36 182 nt-0.93□□□□□ -2.56
RPS28BP0C0X0 tA(UGC)QtA(UGC)Q 76 nt-0.94□□□□□ -2.56
RPS28BP0C0X0 YFL012WYFL012W 447 nt-0.94□□□□□ -2.56
RPS28BP0C0X0 AGA2YGL032C 264 nt-0.95□□□□□ -2.56
RPS28BP0C0X0 YGL123C-AYGL123C-A 231 nt-0.95□□□□□ -2.56
RPS28BP0C0X0 GLG1YKR058W 1851 nt-0.96□□□□□ -2.56
RPS28BP0C0X0 BI2Q0110 1272 nt-0.96□□□□□ -2.56
RPS28BP0C0X0 YER079WYER079W 633 nt-0.97□□□□□ -2.56
RPS28BP0C0X0 YOR032W-AYOR032W-A 201 nt-0.99□□□□□ -2.57
RPS28BP0C0X0 STE18YJR086W 333 nt-1.01□□□□□ -2.57
RPS28BP0C0X0 YKL123WYKL123W 381 nt-1.01□□□□□ -2.57
Retrieved 100 of 7,029 protein–RNA pairs in 74.5 ms