Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.52■□□□□ 0.56
NKX2-2O95096 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.52■□□□□ 0.56
NKX2-2O95096 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.52■□□□□ 0.56
NKX2-2O95096 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.52■□□□□ 0.56
NKX2-2O95096 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NKX2-2O95096 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.52■□□□□ 0.56
NKX2-2O95096 AC104771.1-201ENST00000603335 964 ntBASIC18.52■□□□□ 0.56
NKX2-2O95096 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NKX2-2O95096 MYC-209ENST00000641252 345 ntBASIC18.52■□□□□ 0.56
NKX2-2O95096 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NKX2-2O95096 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NKX2-2O95096 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NKX2-2O95096 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
NKX2-2O95096 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NKX2-2O95096 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.52■□□□□ 0.55
NKX2-2O95096 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
NKX2-2O95096 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
NKX2-2O95096 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NKX2-2O95096 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NKX2-2O95096 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NKX2-2O95096 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NKX2-2O95096 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
NKX2-2O95096 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NKX2-2O95096 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NKX2-2O95096 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NKX2-2O95096 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NKX2-2O95096 SLC25A24-204ENST00000569674 2357 ntBASIC18.51■□□□□ 0.55
NKX2-2O95096 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.51■□□□□ 0.55
NKX2-2O95096 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.51■□□□□ 0.55
NKX2-2O95096 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NKX2-2O95096 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NKX2-2O95096 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.51■□□□□ 0.55
NKX2-2O95096 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.51■□□□□ 0.55
NKX2-2O95096 AC073210.2-201ENST00000430369 194 ntBASIC18.51■□□□□ 0.55
NKX2-2O95096 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.51■□□□□ 0.55
NKX2-2O95096 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NKX2-2O95096 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.51■□□□□ 0.55
NKX2-2O95096 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NKX2-2O95096 AL138781.1-201ENST00000566567 1274 ntBASIC18.51■□□□□ 0.55
NKX2-2O95096 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
NKX2-2O95096 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
NKX2-2O95096 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NKX2-2O95096 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.51■□□□□ 0.55
NKX2-2O95096 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NKX2-2O95096 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NKX2-2O95096 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NKX2-2O95096 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.5■□□□□ 0.55
NKX2-2O95096 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NKX2-2O95096 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NKX2-2O95096 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NKX2-2O95096 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NKX2-2O95096 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.5■□□□□ 0.55
NKX2-2O95096 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.5■□□□□ 0.55
NKX2-2O95096 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.5■□□□□ 0.55
NKX2-2O95096 AC142086.2-201ENST00000569753 217 ntBASIC18.5■□□□□ 0.55
NKX2-2O95096 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.5■□□□□ 0.55
NKX2-2O95096 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
NKX2-2O95096 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NKX2-2O95096 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NKX2-2O95096 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NKX2-2O95096 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
NKX2-2O95096 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NKX2-2O95096 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NKX2-2O95096 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NKX2-2O95096 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NKX2-2O95096 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.5■□□□□ 0.55
NKX2-2O95096 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
NKX2-2O95096 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.49■□□□□ 0.55
NKX2-2O95096 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NKX2-2O95096 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NKX2-2O95096 AC097658.1-201ENST00000475555 843 ntBASIC18.49■□□□□ 0.55
NKX2-2O95096 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.49■□□□□ 0.55
NKX2-2O95096 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
NKX2-2O95096 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.49■□□□□ 0.55
NKX2-2O95096 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NKX2-2O95096 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NKX2-2O95096 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
NKX2-2O95096 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.49■□□□□ 0.55
NKX2-2O95096 PCDHAC2-203ENST00000615316 3011 ntBASIC18.49■□□□□ 0.55
NKX2-2O95096 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
NKX2-2O95096 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NKX2-2O95096 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NKX2-2O95096 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NKX2-2O95096 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
NKX2-2O95096 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NKX2-2O95096 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NKX2-2O95096 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NKX2-2O95096 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
NKX2-2O95096 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.48■□□□□ 0.55
NKX2-2O95096 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.48■□□□□ 0.55
NKX2-2O95096 AC098934.4-201ENST00000564127 592 ntBASIC18.48■□□□□ 0.55
NKX2-2O95096 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.48■□□□□ 0.55
NKX2-2O95096 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
NKX2-2O95096 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.48■□□□□ 0.55
NKX2-2O95096 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NKX2-2O95096 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.48■□□□□ 0.55
NKX2-2O95096 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NKX2-2O95096 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NKX2-2O95096 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.48■□□□□ 0.55
NKX2-2O95096 TMEM179-206ENST00000616017 1645 ntBASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms