Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
BEST1O76090 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
BEST1O76090 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
BEST1O76090 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
BEST1O76090 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
BEST1O76090 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
BEST1O76090 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
BEST1O76090 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
BEST1O76090 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
BEST1O76090 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.08■□□□□ 0.97
BEST1O76090 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
BEST1O76090 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
BEST1O76090 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.08■□□□□ 0.97
BEST1O76090 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
BEST1O76090 AL162377.1-201ENST00000618844 1793 ntBASIC21.08■□□□□ 0.97
BEST1O76090 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
BEST1O76090 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.08■□□□□ 0.97
BEST1O76090 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
BEST1O76090 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.08■□□□□ 0.97
BEST1O76090 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.08■□□□□ 0.97
BEST1O76090 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
BEST1O76090 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
BEST1O76090 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.08■□□□□ 0.96
BEST1O76090 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
BEST1O76090 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
BEST1O76090 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
BEST1O76090 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
BEST1O76090 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.07■□□□□ 0.96
BEST1O76090 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
BEST1O76090 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
BEST1O76090 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.07■□□□□ 0.96
BEST1O76090 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
BEST1O76090 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
BEST1O76090 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
BEST1O76090 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
BEST1O76090 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.07■□□□□ 0.96
BEST1O76090 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.07■□□□□ 0.96
BEST1O76090 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
BEST1O76090 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.07■□□□□ 0.96
BEST1O76090 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
BEST1O76090 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.07■□□□□ 0.96
BEST1O76090 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
BEST1O76090 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
BEST1O76090 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
BEST1O76090 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
BEST1O76090 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
BEST1O76090 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
BEST1O76090 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
BEST1O76090 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.06■□□□□ 0.96
BEST1O76090 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
BEST1O76090 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
BEST1O76090 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
BEST1O76090 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.06■□□□□ 0.96
BEST1O76090 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.06■□□□□ 0.96
BEST1O76090 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.06■□□□□ 0.96
BEST1O76090 RN7SL471P-201ENST00000580476 299 ntBASIC21.06■□□□□ 0.96
BEST1O76090 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
BEST1O76090 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.06■□□□□ 0.96
BEST1O76090 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.06■□□□□ 0.96
BEST1O76090 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
BEST1O76090 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
BEST1O76090 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
BEST1O76090 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
BEST1O76090 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
BEST1O76090 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.06■□□□□ 0.96
BEST1O76090 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
BEST1O76090 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
BEST1O76090 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.05■□□□□ 0.96
BEST1O76090 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BEST1O76090 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BEST1O76090 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
BEST1O76090 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.05■□□□□ 0.96
BEST1O76090 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
BEST1O76090 GCSHP5-201ENST00000443090 522 ntBASIC21.05■□□□□ 0.96
BEST1O76090 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.05■□□□□ 0.96
BEST1O76090 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.05■□□□□ 0.96
BEST1O76090 MTDHP1-201ENST00000605323 784 ntBASIC21.05■□□□□ 0.96
BEST1O76090 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
BEST1O76090 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BEST1O76090 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
BEST1O76090 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BEST1O76090 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
BEST1O76090 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
BEST1O76090 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
BEST1O76090 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
BEST1O76090 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
BEST1O76090 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.04■□□□□ 0.96
BEST1O76090 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
BEST1O76090 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
BEST1O76090 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
BEST1O76090 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.04■□□□□ 0.96
BEST1O76090 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.04■□□□□ 0.96
BEST1O76090 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
BEST1O76090 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.04■□□□□ 0.96
BEST1O76090 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
BEST1O76090 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
BEST1O76090 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.04■□□□□ 0.96
BEST1O76090 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
BEST1O76090 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
BEST1O76090 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms