Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRICKLE3O43900 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRICKLE3O43900 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.26■□□□□ 0.67
PRICKLE3O43900 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PRICKLE3O43900 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRICKLE3O43900 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRICKLE3O43900 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PRICKLE3O43900 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRICKLE3O43900 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRICKLE3O43900 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PRICKLE3O43900 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
PRICKLE3O43900 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.26■□□□□ 0.67
PRICKLE3O43900 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PRICKLE3O43900 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PRICKLE3O43900 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.25■□□□□ 0.67
PRICKLE3O43900 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PRICKLE3O43900 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRICKLE3O43900 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRICKLE3O43900 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
PRICKLE3O43900 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRICKLE3O43900 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PRICKLE3O43900 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PRICKLE3O43900 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRICKLE3O43900 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRICKLE3O43900 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.25■□□□□ 0.67
PRICKLE3O43900 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.25■□□□□ 0.67
PRICKLE3O43900 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PRICKLE3O43900 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.25■□□□□ 0.67
PRICKLE3O43900 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.25■□□□□ 0.67
PRICKLE3O43900 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
PRICKLE3O43900 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRICKLE3O43900 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PRICKLE3O43900 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PRICKLE3O43900 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRICKLE3O43900 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRICKLE3O43900 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.25■□□□□ 0.67
PRICKLE3O43900 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRICKLE3O43900 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PRICKLE3O43900 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.24■□□□□ 0.67
PRICKLE3O43900 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PRICKLE3O43900 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.24■□□□□ 0.67
PRICKLE3O43900 LINC01521-201ENST00000504184 1943 ntBASIC19.24■□□□□ 0.67
PRICKLE3O43900 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.24■□□□□ 0.67
PRICKLE3O43900 POM121L13P-201ENST00000422362 380 ntBASIC19.24■□□□□ 0.67
PRICKLE3O43900 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.24■□□□□ 0.67
PRICKLE3O43900 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.24■□□□□ 0.67
PRICKLE3O43900 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.24■□□□□ 0.67
PRICKLE3O43900 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.24■□□□□ 0.67
PRICKLE3O43900 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.24■□□□□ 0.67
PRICKLE3O43900 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.24■□□□□ 0.67
PRICKLE3O43900 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.24■□□□□ 0.67
PRICKLE3O43900 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.24■□□□□ 0.67
PRICKLE3O43900 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRICKLE3O43900 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.24■□□□□ 0.67
PRICKLE3O43900 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PRICKLE3O43900 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRICKLE3O43900 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.23■□□□□ 0.67
PRICKLE3O43900 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRICKLE3O43900 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRICKLE3O43900 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.23■□□□□ 0.67
PRICKLE3O43900 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRICKLE3O43900 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRICKLE3O43900 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PRICKLE3O43900 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.23■□□□□ 0.67
PRICKLE3O43900 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PRICKLE3O43900 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRICKLE3O43900 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.23■□□□□ 0.67
PRICKLE3O43900 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRICKLE3O43900 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.23■□□□□ 0.67
PRICKLE3O43900 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PRICKLE3O43900 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRICKLE3O43900 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PRICKLE3O43900 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.23■□□□□ 0.67
PRICKLE3O43900 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRICKLE3O43900 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PRICKLE3O43900 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PRICKLE3O43900 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PRICKLE3O43900 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PRICKLE3O43900 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRICKLE3O43900 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRICKLE3O43900 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PRICKLE3O43900 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
PRICKLE3O43900 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.67
PRICKLE3O43900 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRICKLE3O43900 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.22■□□□□ 0.67
PRICKLE3O43900 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PRICKLE3O43900 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRICKLE3O43900 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.22■□□□□ 0.67
PRICKLE3O43900 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRICKLE3O43900 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRICKLE3O43900 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.22■□□□□ 0.67
PRICKLE3O43900 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRICKLE3O43900 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.22■□□□□ 0.67
PRICKLE3O43900 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PRICKLE3O43900 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PRICKLE3O43900 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.22■□□□□ 0.67
PRICKLE3O43900 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PRICKLE3O43900 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRICKLE3O43900 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PRICKLE3O43900 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms