Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SGCEO43556 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.67■□□□□ 0.42
SGCEO43556 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.67■□□□□ 0.42
SGCEO43556 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SGCEO43556 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SGCEO43556 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SGCEO43556 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.67■□□□□ 0.42
SGCEO43556 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SGCEO43556 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.67■□□□□ 0.42
SGCEO43556 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SGCEO43556 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SGCEO43556 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SGCEO43556 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SGCEO43556 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SGCEO43556 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.67■□□□□ 0.42
SGCEO43556 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.67■□□□□ 0.42
SGCEO43556 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SGCEO43556 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SGCEO43556 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.67■□□□□ 0.42
SGCEO43556 AC133552.2-202ENST00000575694 574 ntBASIC17.67■□□□□ 0.42
SGCEO43556 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.67■□□□□ 0.42
SGCEO43556 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SGCEO43556 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
SGCEO43556 AC105020.6-201ENST00000621523 1217 ntBASIC17.67■□□□□ 0.42
SGCEO43556 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.67■□□□□ 0.42
SGCEO43556 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.67■□□□□ 0.42
SGCEO43556 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SGCEO43556 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SGCEO43556 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SGCEO43556 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SGCEO43556 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SGCEO43556 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SGCEO43556 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SGCEO43556 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SGCEO43556 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SGCEO43556 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SGCEO43556 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.66■□□□□ 0.42
SGCEO43556 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SGCEO43556 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
SGCEO43556 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SGCEO43556 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SGCEO43556 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SGCEO43556 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.66■□□□□ 0.42
SGCEO43556 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SGCEO43556 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.66■□□□□ 0.42
SGCEO43556 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.66■□□□□ 0.42
SGCEO43556 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
SGCEO43556 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SGCEO43556 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.66■□□□□ 0.42
SGCEO43556 MIR663A-201ENST00000385250 93 ntBASIC17.66■□□□□ 0.42
SGCEO43556 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.66■□□□□ 0.42
SGCEO43556 AL355472.2-201ENST00000422958 438 ntBASIC17.66■□□□□ 0.42
SGCEO43556 AC093787.1-201ENST00000450396 207 ntBASIC17.66■□□□□ 0.42
SGCEO43556 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.66■□□□□ 0.42
SGCEO43556 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SGCEO43556 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SGCEO43556 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
SGCEO43556 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
SGCEO43556 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.66■□□□□ 0.42
SGCEO43556 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SGCEO43556 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.66■□□□□ 0.42
SGCEO43556 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.66■□□□□ 0.42
SGCEO43556 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SGCEO43556 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SGCEO43556 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.66■□□□□ 0.42
SGCEO43556 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SGCEO43556 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SGCEO43556 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.65■□□□□ 0.42
SGCEO43556 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.65■□□□□ 0.42
SGCEO43556 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.65■□□□□ 0.42
SGCEO43556 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.65■□□□□ 0.42
SGCEO43556 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SGCEO43556 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SGCEO43556 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SGCEO43556 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SGCEO43556 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SGCEO43556 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SGCEO43556 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SGCEO43556 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.65■□□□□ 0.42
SGCEO43556 RAP2CP1-201ENST00000605103 478 ntBASIC17.65■□□□□ 0.42
SGCEO43556 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.65■□□□□ 0.42
SGCEO43556 AL589743.5-201ENST00000616611 1050 ntBASIC17.65■□□□□ 0.42
SGCEO43556 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SGCEO43556 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SGCEO43556 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SGCEO43556 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SGCEO43556 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.65■□□□□ 0.42
SGCEO43556 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
SGCEO43556 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.65■□□□□ 0.42
SGCEO43556 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.65■□□□□ 0.42
SGCEO43556 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.65■□□□□ 0.42
SGCEO43556 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SGCEO43556 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.42
SGCEO43556 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SGCEO43556 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SGCEO43556 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.64■□□□□ 0.41
SGCEO43556 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.64■□□□□ 0.41
SGCEO43556 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SGCEO43556 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SGCEO43556 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms