Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
PROM1O43490 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
PROM1O43490 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PROM1O43490 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
PROM1O43490 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PROM1O43490 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19■□□□□ 0.63
PROM1O43490 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19■□□□□ 0.63
PROM1O43490 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PROM1O43490 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
PROM1O43490 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19■□□□□ 0.63
PROM1O43490 ABHD17AP1-201ENST00000358206 933 ntBASIC19■□□□□ 0.63
PROM1O43490 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PROM1O43490 OR2A1-AS1-201ENST00000462305 773 ntBASIC19■□□□□ 0.63
PROM1O43490 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19■□□□□ 0.63
PROM1O43490 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19■□□□□ 0.63
PROM1O43490 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19■□□□□ 0.63
PROM1O43490 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19■□□□□ 0.63
PROM1O43490 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19■□□□□ 0.63
PROM1O43490 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
PROM1O43490 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
PROM1O43490 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
PROM1O43490 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PROM1O43490 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PROM1O43490 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19■□□□□ 0.63
PROM1O43490 AL391422.3-201ENST00000603791 2761 ntBASIC19■□□□□ 0.63
PROM1O43490 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19■□□□□ 0.63
PROM1O43490 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19■□□□□ 0.63
PROM1O43490 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PROM1O43490 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19■□□□□ 0.63
PROM1O43490 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PROM1O43490 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PROM1O43490 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.99■□□□□ 0.63
PROM1O43490 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PROM1O43490 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PROM1O43490 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.99■□□□□ 0.63
PROM1O43490 DUSP5P2-201ENST00000426873 1033 ntBASIC18.99■□□□□ 0.63
PROM1O43490 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.99■□□□□ 0.63
PROM1O43490 AL138781.1-201ENST00000566567 1274 ntBASIC18.99■□□□□ 0.63
PROM1O43490 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.99■□□□□ 0.63
PROM1O43490 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.99■□□□□ 0.63
PROM1O43490 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.99■□□□□ 0.63
PROM1O43490 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
PROM1O43490 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PROM1O43490 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PROM1O43490 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.99■□□□□ 0.63
PROM1O43490 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PROM1O43490 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.99■□□□□ 0.63
PROM1O43490 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PROM1O43490 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PROM1O43490 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PROM1O43490 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.99■□□□□ 0.63
PROM1O43490 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PROM1O43490 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PROM1O43490 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.98■□□□□ 0.63
PROM1O43490 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PROM1O43490 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PROM1O43490 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
PROM1O43490 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PROM1O43490 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PROM1O43490 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PROM1O43490 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PROM1O43490 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PROM1O43490 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PROM1O43490 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PROM1O43490 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.98■□□□□ 0.63
PROM1O43490 AC091874.3-201ENST00000512672 1195 ntBASIC18.98■□□□□ 0.63
PROM1O43490 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.98■□□□□ 0.63
PROM1O43490 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PROM1O43490 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PROM1O43490 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PROM1O43490 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PROM1O43490 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PROM1O43490 KRT8P17-201ENST00000453110 1448 ntBASIC18.98■□□□□ 0.63
PROM1O43490 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
PROM1O43490 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PROM1O43490 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.97■□□□□ 0.63
PROM1O43490 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PROM1O43490 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PROM1O43490 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PROM1O43490 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PROM1O43490 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PROM1O43490 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.97■□□□□ 0.63
PROM1O43490 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PROM1O43490 AC073210.2-201ENST00000430369 194 ntBASIC18.97■□□□□ 0.63
PROM1O43490 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.97■□□□□ 0.63
PROM1O43490 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.97■□□□□ 0.63
PROM1O43490 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PROM1O43490 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.97■□□□□ 0.63
PROM1O43490 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PROM1O43490 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PROM1O43490 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PROM1O43490 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
PROM1O43490 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PROM1O43490 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PROM1O43490 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PROM1O43490 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PROM1O43490 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PROM1O43490 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PROM1O43490 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PROM1O43490 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms