Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NDUFA4O00483 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC15.38■□□□□ 0.05
NDUFA4O00483 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
NDUFA4O00483 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC15.38■□□□□ 0.05
NDUFA4O00483 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NDUFA4O00483 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC15.38■□□□□ 0.05
NDUFA4O00483 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
NDUFA4O00483 PFKL-212ENST00000628044 129 ntTSL 3 BASIC15.38■□□□□ 0.05
NDUFA4O00483 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NDUFA4O00483 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NDUFA4O00483 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
NDUFA4O00483 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NDUFA4O00483 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NDUFA4O00483 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NDUFA4O00483 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC15.38■□□□□ 0.05
NDUFA4O00483 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
NDUFA4O00483 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC15.38■□□□□ 0.05
NDUFA4O00483 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NDUFA4O00483 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NDUFA4O00483 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC15.37■□□□□ 0.05
NDUFA4O00483 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC15.37■□□□□ 0.05
NDUFA4O00483 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NDUFA4O00483 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NDUFA4O00483 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
NDUFA4O00483 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NDUFA4O00483 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC15.37■□□□□ 0.05
NDUFA4O00483 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
NDUFA4O00483 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
NDUFA4O00483 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NDUFA4O00483 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NDUFA4O00483 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC15.37■□□□□ 0.05
NDUFA4O00483 MAP2K4P1-201ENST00000438453 1195 ntBASIC15.37■□□□□ 0.05
NDUFA4O00483 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
NDUFA4O00483 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC15.37■□□□□ 0.05
NDUFA4O00483 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC15.37■□□□□ 0.05
NDUFA4O00483 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NDUFA4O00483 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC15.37■□□□□ 0.05
NDUFA4O00483 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC15.37■□□□□ 0.05
NDUFA4O00483 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC15.37■□□□□ 0.05
NDUFA4O00483 GXYLT1P5-201ENST00000614548 1189 ntBASIC15.37■□□□□ 0.05
NDUFA4O00483 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC15.37■□□□□ 0.05
NDUFA4O00483 AIRN-201ENST00000601203 4374 ntBASIC15.37■□□□□ 0.05
NDUFA4O00483 ADM-207ENST00000530439 1839 ntTSL 2 BASIC15.37■□□□□ 0.05
NDUFA4O00483 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC15.37■□□□□ 0.05
NDUFA4O00483 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
NDUFA4O00483 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NDUFA4O00483 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NDUFA4O00483 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NDUFA4O00483 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NDUFA4O00483 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
NDUFA4O00483 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NDUFA4O00483 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC15.37■□□□□ 0.05
NDUFA4O00483 TCF3P1-201ENST00000423021 1937 ntBASIC15.37■□□□□ 0.05
NDUFA4O00483 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NDUFA4O00483 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NDUFA4O00483 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
NDUFA4O00483 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFA4O00483 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC15.36■□□□□ 0.05
NDUFA4O00483 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
NDUFA4O00483 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC15.36■□□□□ 0.05
NDUFA4O00483 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFA4O00483 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFA4O00483 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFA4O00483 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFA4O00483 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFA4O00483 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFA4O00483 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFA4O00483 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFA4O00483 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFA4O00483 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFA4O00483 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC15.36■□□□□ 0.05
NDUFA4O00483 DUSP5P2-201ENST00000426873 1033 ntBASIC15.36■□□□□ 0.05
NDUFA4O00483 GUSBP6-202ENST00000438529 1198 ntBASIC15.36■□□□□ 0.05
NDUFA4O00483 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC15.36■□□□□ 0.05
NDUFA4O00483 AC090192.1-201ENST00000517740 490 ntBASIC15.36■□□□□ 0.05
NDUFA4O00483 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
NDUFA4O00483 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC15.36■□□□□ 0.05
NDUFA4O00483 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC15.36■□□□□ 0.05
NDUFA4O00483 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFA4O00483 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFA4O00483 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC15.36■□□□□ 0.05
NDUFA4O00483 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC15.36■□□□□ 0.05
NDUFA4O00483 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
NDUFA4O00483 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFA4O00483 CRK-204ENST00000574295 1391 ntTSL 5 BASIC15.36■□□□□ 0.05
NDUFA4O00483 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFA4O00483 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC15.35■□□□□ 0.05
NDUFA4O00483 MED17-221ENST00000639724 2317 ntTSL 5 BASIC15.35■□□□□ 0.05
NDUFA4O00483 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFA4O00483 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFA4O00483 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFA4O00483 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFA4O00483 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
NDUFA4O00483 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFA4O00483 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC15.35■□□□□ 0.05
NDUFA4O00483 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC15.35■□□□□ 0.05
NDUFA4O00483 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFA4O00483 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFA4O00483 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
NDUFA4O00483 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms