Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SRRM4A7MD48 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.13■□□□□ 0.17
SRRM4A7MD48 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SRRM4A7MD48 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SRRM4A7MD48 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.13■□□□□ 0.17
SRRM4A7MD48 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SRRM4A7MD48 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SRRM4A7MD48 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SRRM4A7MD48 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SRRM4A7MD48 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SRRM4A7MD48 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.13■□□□□ 0.17
SRRM4A7MD48 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.13■□□□□ 0.17
SRRM4A7MD48 IKBKGP1-201ENST00000612193 1073 ntBASIC16.13■□□□□ 0.17
SRRM4A7MD48 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.13■□□□□ 0.17
SRRM4A7MD48 AC105020.6-201ENST00000621523 1217 ntBASIC16.13■□□□□ 0.17
SRRM4A7MD48 AC008694.1-202ENST00000636953 945 ntBASIC16.13■□□□□ 0.17
SRRM4A7MD48 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.13■□□□□ 0.17
SRRM4A7MD48 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SRRM4A7MD48 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SRRM4A7MD48 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SRRM4A7MD48 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SRRM4A7MD48 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SRRM4A7MD48 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SRRM4A7MD48 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
SRRM4A7MD48 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SRRM4A7MD48 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SRRM4A7MD48 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SRRM4A7MD48 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.12■□□□□ 0.17
SRRM4A7MD48 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.12■□□□□ 0.17
SRRM4A7MD48 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SRRM4A7MD48 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.12■□□□□ 0.17
SRRM4A7MD48 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.12■□□□□ 0.17
SRRM4A7MD48 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
SRRM4A7MD48 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SRRM4A7MD48 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.12■□□□□ 0.17
SRRM4A7MD48 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SRRM4A7MD48 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SRRM4A7MD48 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SRRM4A7MD48 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SRRM4A7MD48 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SRRM4A7MD48 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SRRM4A7MD48 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SRRM4A7MD48 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SRRM4A7MD48 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.11■□□□□ 0.17
SRRM4A7MD48 AC010980.2-201ENST00000587099 1412 ntBASIC16.11■□□□□ 0.17
SRRM4A7MD48 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.11■□□□□ 0.17
SRRM4A7MD48 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.11■□□□□ 0.17
SRRM4A7MD48 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SRRM4A7MD48 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRRM4A7MD48 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.11■□□□□ 0.17
SRRM4A7MD48 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SRRM4A7MD48 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRRM4A7MD48 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SRRM4A7MD48 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SRRM4A7MD48 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.11■□□□□ 0.17
SRRM4A7MD48 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.11■□□□□ 0.17
SRRM4A7MD48 AC093787.1-201ENST00000450396 207 ntBASIC16.11■□□□□ 0.17
SRRM4A7MD48 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC16.11■□□□□ 0.17
SRRM4A7MD48 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SRRM4A7MD48 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.11■□□□□ 0.17
SRRM4A7MD48 OR10C1-204ENST00000622521 1039 ntBASIC16.11■□□□□ 0.17
SRRM4A7MD48 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.11■□□□□ 0.17
SRRM4A7MD48 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
SRRM4A7MD48 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRRM4A7MD48 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SRRM4A7MD48 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRRM4A7MD48 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRRM4A7MD48 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRRM4A7MD48 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.11■□□□□ 0.17
SRRM4A7MD48 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SRRM4A7MD48 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRRM4A7MD48 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRRM4A7MD48 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC16.1■□□□□ 0.17
SRRM4A7MD48 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRRM4A7MD48 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRRM4A7MD48 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SRRM4A7MD48 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.1■□□□□ 0.17
SRRM4A7MD48 AL158211.5-201ENST00000623583 2518 ntBASIC16.1■□□□□ 0.17
SRRM4A7MD48 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.1■□□□□ 0.17
SRRM4A7MD48 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRRM4A7MD48 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRRM4A7MD48 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRRM4A7MD48 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRRM4A7MD48 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRRM4A7MD48 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRRM4A7MD48 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
SRRM4A7MD48 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SRRM4A7MD48 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.1■□□□□ 0.17
SRRM4A7MD48 AC005181.1-201ENST00000604782 1256 ntBASIC16.1■□□□□ 0.17
SRRM4A7MD48 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC16.1■□□□□ 0.17
SRRM4A7MD48 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRRM4A7MD48 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SRRM4A7MD48 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRRM4A7MD48 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRRM4A7MD48 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRRM4A7MD48 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRRM4A7MD48 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.1■□□□□ 0.17
SRRM4A7MD48 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRRM4A7MD48 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRRM4A7MD48 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms