Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 AC007663.1-201ENST00000438948 1240 ntBASIC19.27■□□□□ 0.67
CNOT1A5YKK6 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.27■□□□□ 0.67
CNOT1A5YKK6 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CNOT1A5YKK6 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.27■□□□□ 0.67
CNOT1A5YKK6 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.26■□□□□ 0.67
CNOT1A5YKK6 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.26■□□□□ 0.67
CNOT1A5YKK6 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CNOT1A5YKK6 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CNOT1A5YKK6 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNOT1A5YKK6 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CNOT1A5YKK6 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNOT1A5YKK6 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CNOT1A5YKK6 AC246785.2-201ENST00000432512 513 ntBASIC19.26■□□□□ 0.67
CNOT1A5YKK6 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.26■□□□□ 0.67
CNOT1A5YKK6 AL359075.1-203ENST00000462729 1002 ntBASIC19.26■□□□□ 0.67
CNOT1A5YKK6 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.26■□□□□ 0.67
CNOT1A5YKK6 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.26■□□□□ 0.67
CNOT1A5YKK6 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.26■□□□□ 0.67
CNOT1A5YKK6 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.26■□□□□ 0.67
CNOT1A5YKK6 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CNOT1A5YKK6 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CNOT1A5YKK6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CNOT1A5YKK6 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.26■□□□□ 0.67
CNOT1A5YKK6 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNOT1A5YKK6 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CNOT1A5YKK6 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.26■□□□□ 0.67
CNOT1A5YKK6 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.26■□□□□ 0.67
CNOT1A5YKK6 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.26■□□□□ 0.67
CNOT1A5YKK6 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CNOT1A5YKK6 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.26■□□□□ 0.67
CNOT1A5YKK6 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.26■□□□□ 0.67
CNOT1A5YKK6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CNOT1A5YKK6 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.25■□□□□ 0.67
CNOT1A5YKK6 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNOT1A5YKK6 AC080038.3-201ENST00000623346 1952 ntBASIC19.25■□□□□ 0.67
CNOT1A5YKK6 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNOT1A5YKK6 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CNOT1A5YKK6 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.25■□□□□ 0.67
CNOT1A5YKK6 AC023632.3-201ENST00000521633 145 ntBASIC19.25■□□□□ 0.67
CNOT1A5YKK6 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CNOT1A5YKK6 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNOT1A5YKK6 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNOT1A5YKK6 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.25■□□□□ 0.67
CNOT1A5YKK6 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CNOT1A5YKK6 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CNOT1A5YKK6 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNOT1A5YKK6 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CNOT1A5YKK6 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNOT1A5YKK6 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNOT1A5YKK6 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNOT1A5YKK6 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNOT1A5YKK6 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNOT1A5YKK6 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.24■□□□□ 0.67
CNOT1A5YKK6 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.24■□□□□ 0.67
CNOT1A5YKK6 KRT18P16-201ENST00000510337 1294 ntBASIC19.24■□□□□ 0.67
CNOT1A5YKK6 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNOT1A5YKK6 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.24■□□□□ 0.67
CNOT1A5YKK6 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.24■□□□□ 0.67
CNOT1A5YKK6 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
CNOT1A5YKK6 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CNOT1A5YKK6 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNOT1A5YKK6 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CNOT1A5YKK6 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.24■□□□□ 0.67
CNOT1A5YKK6 KRT8P45-201ENST00000414328 1447 ntBASIC19.24■□□□□ 0.67
CNOT1A5YKK6 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CNOT1A5YKK6 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.24■□□□□ 0.67
CNOT1A5YKK6 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CNOT1A5YKK6 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNOT1A5YKK6 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNOT1A5YKK6 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNOT1A5YKK6 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CNOT1A5YKK6 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.24■□□□□ 0.67
CNOT1A5YKK6 COX11P1-201ENST00000489116 835 ntBASIC19.24■□□□□ 0.67
CNOT1A5YKK6 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.24■□□□□ 0.67
CNOT1A5YKK6 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.24■□□□□ 0.67
CNOT1A5YKK6 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNOT1A5YKK6 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.23■□□□□ 0.67
CNOT1A5YKK6 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.23■□□□□ 0.67
CNOT1A5YKK6 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.23■□□□□ 0.67
CNOT1A5YKK6 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNOT1A5YKK6 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.23■□□□□ 0.67
CNOT1A5YKK6 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.23■□□□□ 0.67
CNOT1A5YKK6 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.23■□□□□ 0.67
CNOT1A5YKK6 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNOT1A5YKK6 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CNOT1A5YKK6 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CNOT1A5YKK6 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CNOT1A5YKK6 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CNOT1A5YKK6 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.22■□□□□ 0.67
CNOT1A5YKK6 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CNOT1A5YKK6 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.22■□□□□ 0.67
CNOT1A5YKK6 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.22■□□□□ 0.67
CNOT1A5YKK6 PTBP1P-201ENST00000554374 1601 ntBASIC19.22■□□□□ 0.67
CNOT1A5YKK6 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.22■□□□□ 0.67
CNOT1A5YKK6 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNOT1A5YKK6 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.22■□□□□ 0.67
CNOT1A5YKK6 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNOT1A5YKK6 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNOT1A5YKK6 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CNOT1A5YKK6 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms