Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CCDC162PA2VCL2 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC162PA2VCL2 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
CCDC162PA2VCL2 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CCDC162PA2VCL2 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC162PA2VCL2 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC162PA2VCL2 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC162PA2VCL2 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CCDC162PA2VCL2 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CCDC162PA2VCL2 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CCDC162PA2VCL2 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC162PA2VCL2 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC162PA2VCL2 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC162PA2VCL2 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC162PA2VCL2 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC162PA2VCL2 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
CCDC162PA2VCL2 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC162PA2VCL2 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC162PA2VCL2 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC162PA2VCL2 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC162PA2VCL2 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC162PA2VCL2 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC162PA2VCL2 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC162PA2VCL2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC162PA2VCL2 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC162PA2VCL2 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC162PA2VCL2 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CCDC162PA2VCL2 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC162PA2VCL2 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC162PA2VCL2 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.03■□□□□ 0.8
CCDC162PA2VCL2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC162PA2VCL2 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CCDC162PA2VCL2 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC162PA2VCL2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC162PA2VCL2 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC162PA2VCL2 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.03■□□□□ 0.8
CCDC162PA2VCL2 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CCDC162PA2VCL2 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC162PA2VCL2 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.03■□□□□ 0.8
CCDC162PA2VCL2 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CCDC162PA2VCL2 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC162PA2VCL2 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC162PA2VCL2 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC162PA2VCL2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC162PA2VCL2 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC162PA2VCL2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC162PA2VCL2 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC162PA2VCL2 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC162PA2VCL2 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CCDC162PA2VCL2 GPX1P1-201ENST00000388829 606 ntBASIC20.02■□□□□ 0.8
CCDC162PA2VCL2 TSPY6P-201ENST00000448518 926 ntBASIC20.02■□□□□ 0.8
CCDC162PA2VCL2 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC162PA2VCL2 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.02■□□□□ 0.8
CCDC162PA2VCL2 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC162PA2VCL2 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC162PA2VCL2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC162PA2VCL2 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC162PA2VCL2 KRT8P17-201ENST00000453110 1448 ntBASIC20.02■□□□□ 0.79
CCDC162PA2VCL2 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CCDC162PA2VCL2 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CCDC162PA2VCL2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CCDC162PA2VCL2 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC162PA2VCL2 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC162PA2VCL2 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC162PA2VCL2 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC162PA2VCL2 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC162PA2VCL2 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CCDC162PA2VCL2 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC162PA2VCL2 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC162PA2VCL2 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC162PA2VCL2 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
CCDC162PA2VCL2 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC162PA2VCL2 AC090192.1-201ENST00000517740 490 ntBASIC20.01■□□□□ 0.79
CCDC162PA2VCL2 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC162PA2VCL2 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC162PA2VCL2 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC162PA2VCL2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.01■□□□□ 0.79
CCDC162PA2VCL2 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC162PA2VCL2 AL691432.2-201ENST00000607222 2038 ntBASIC20.01■□□□□ 0.79
CCDC162PA2VCL2 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC162PA2VCL2 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CCDC162PA2VCL2 AFG3L1P-217ENST00000557444 2447 ntBASIC20.01■□□□□ 0.79
CCDC162PA2VCL2 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC162PA2VCL2 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC162PA2VCL2 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC162PA2VCL2 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC162PA2VCL2 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC162PA2VCL2 OR2A1-AS1-201ENST00000462305 773 ntBASIC20■□□□□ 0.79
CCDC162PA2VCL2 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20■□□□□ 0.79
CCDC162PA2VCL2 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20■□□□□ 0.79
CCDC162PA2VCL2 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC162PA2VCL2 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC162PA2VCL2 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20■□□□□ 0.79
CCDC162PA2VCL2 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC162PA2VCL2 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CCDC162PA2VCL2 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC162PA2VCL2 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC162PA2VCL2 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC162PA2VCL2 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC162PA2VCL2 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms