Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.96■□□□□ 0.95
TCRBV5S1A1TA0A578 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.96■□□□□ 0.95
TCRBV5S1A1TA0A578 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.96■□□□□ 0.95
TCRBV5S1A1TA0A578 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TCRBV5S1A1TA0A578 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TCRBV5S1A1TA0A578 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TCRBV5S1A1TA0A578 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TCRBV5S1A1TA0A578 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TCRBV5S1A1TA0A578 AC009237.14-201ENST00000609975 1594 ntBASIC20.95■□□□□ 0.94
TCRBV5S1A1TA0A578 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TCRBV5S1A1TA0A578 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
TCRBV5S1A1TA0A578 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TCRBV5S1A1TA0A578 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
TCRBV5S1A1TA0A578 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.95■□□□□ 0.94
TCRBV5S1A1TA0A578 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.95■□□□□ 0.94
TCRBV5S1A1TA0A578 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.95■□□□□ 0.94
TCRBV5S1A1TA0A578 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.95■□□□□ 0.94
TCRBV5S1A1TA0A578 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
TCRBV5S1A1TA0A578 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
TCRBV5S1A1TA0A578 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.95■□□□□ 0.94
TCRBV5S1A1TA0A578 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TCRBV5S1A1TA0A578 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TCRBV5S1A1TA0A578 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
TCRBV5S1A1TA0A578 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TCRBV5S1A1TA0A578 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.95■□□□□ 0.94
TCRBV5S1A1TA0A578 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TCRBV5S1A1TA0A578 KRT16P6-202ENST00000425692 1426 ntBASIC20.95■□□□□ 0.94
TCRBV5S1A1TA0A578 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.95■□□□□ 0.94
TCRBV5S1A1TA0A578 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TCRBV5S1A1TA0A578 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TCRBV5S1A1TA0A578 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
TCRBV5S1A1TA0A578 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.94■□□□□ 0.94
TCRBV5S1A1TA0A578 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TCRBV5S1A1TA0A578 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
TCRBV5S1A1TA0A578 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TCRBV5S1A1TA0A578 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.94■□□□□ 0.94
TCRBV5S1A1TA0A578 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TCRBV5S1A1TA0A578 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TCRBV5S1A1TA0A578 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.94■□□□□ 0.94
TCRBV5S1A1TA0A578 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.94■□□□□ 0.94
TCRBV5S1A1TA0A578 AC090192.1-201ENST00000517740 490 ntBASIC20.94■□□□□ 0.94
TCRBV5S1A1TA0A578 AC098934.4-201ENST00000564127 592 ntBASIC20.94■□□□□ 0.94
TCRBV5S1A1TA0A578 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.94■□□□□ 0.94
TCRBV5S1A1TA0A578 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
TCRBV5S1A1TA0A578 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TCRBV5S1A1TA0A578 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TCRBV5S1A1TA0A578 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TCRBV5S1A1TA0A578 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
TCRBV5S1A1TA0A578 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TCRBV5S1A1TA0A578 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TCRBV5S1A1TA0A578 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TCRBV5S1A1TA0A578 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
TCRBV5S1A1TA0A578 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TCRBV5S1A1TA0A578 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TCRBV5S1A1TA0A578 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
TCRBV5S1A1TA0A578 HLA-G-202ENST00000376815 851 ntBASIC20.93■□□□□ 0.94
TCRBV5S1A1TA0A578 HLA-G-203ENST00000376818 1127 ntBASIC20.93■□□□□ 0.94
TCRBV5S1A1TA0A578 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
TCRBV5S1A1TA0A578 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.93■□□□□ 0.94
TCRBV5S1A1TA0A578 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.93■□□□□ 0.94
TCRBV5S1A1TA0A578 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.93■□□□□ 0.94
TCRBV5S1A1TA0A578 AL138781.1-201ENST00000566567 1274 ntBASIC20.93■□□□□ 0.94
TCRBV5S1A1TA0A578 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.93■□□□□ 0.94
TCRBV5S1A1TA0A578 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.93■□□□□ 0.94
TCRBV5S1A1TA0A578 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.93■□□□□ 0.94
TCRBV5S1A1TA0A578 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.93■□□□□ 0.94
TCRBV5S1A1TA0A578 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.93■□□□□ 0.94
TCRBV5S1A1TA0A578 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TCRBV5S1A1TA0A578 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TCRBV5S1A1TA0A578 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
TCRBV5S1A1TA0A578 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.93■□□□□ 0.94
TCRBV5S1A1TA0A578 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TCRBV5S1A1TA0A578 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TCRBV5S1A1TA0A578 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TCRBV5S1A1TA0A578 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
TCRBV5S1A1TA0A578 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TCRBV5S1A1TA0A578 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TCRBV5S1A1TA0A578 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.92■□□□□ 0.94
TCRBV5S1A1TA0A578 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
TCRBV5S1A1TA0A578 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
TCRBV5S1A1TA0A578 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.92■□□□□ 0.94
TCRBV5S1A1TA0A578 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TCRBV5S1A1TA0A578 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.92■□□□□ 0.94
TCRBV5S1A1TA0A578 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.92■□□□□ 0.94
TCRBV5S1A1TA0A578 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TCRBV5S1A1TA0A578 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.92■□□□□ 0.94
TCRBV5S1A1TA0A578 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TCRBV5S1A1TA0A578 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.92■□□□□ 0.94
TCRBV5S1A1TA0A578 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.92■□□□□ 0.94
TCRBV5S1A1TA0A578 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TCRBV5S1A1TA0A578 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TCRBV5S1A1TA0A578 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
TCRBV5S1A1TA0A578 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TCRBV5S1A1TA0A578 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TCRBV5S1A1TA0A578 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TCRBV5S1A1TA0A578 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TCRBV5S1A1TA0A578 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TCRBV5S1A1TA0A578 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TCRBV5S1A1TA0A578 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.91■□□□□ 0.94
TCRBV5S1A1TA0A578 SLC29A4P1-201ENST00000398760 971 ntBASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms