Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 ZNF182-201ENST00000376943 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 TMCO5A-201ENST00000319669 1274 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 PSMD10-203ENST00000340200 713 ntTSL 3 BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 RNU6-386P-201ENST00000362650 107 ntBASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 MGST3-202ENST00000367884 716 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 MIR7-1-201ENST00000384871 110 ntBASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 RPL34-201ENST00000394665 529 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 PPP1R7-204ENST00000402734 883 ntTSL 3 BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 KRT18P52-201ENST00000404956 846 ntBASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 EEF1B2P8-201ENST00000414101 671 ntBASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 YWHAZP3-201ENST00000415292 738 ntBASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 AC017104.2-201ENST00000417000 321 ntBASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 MED15P9-201ENST00000424716 533 ntBASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 RBMY2JP-201ENST00000425544 1059 ntBASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 AC073508.1-201ENST00000428866 656 ntBASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 CLIC4P1-201ENST00000453177 535 ntBASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 KIF3AP1-201ENST00000454055 611 ntBASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 LARP7P4-201ENST00000481075 878 ntBASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 RN7SL563P-201ENST00000481233 298 ntBASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 LINC01096-201ENST00000501050 1263 ntTSL 2 BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 RPL34-204ENST00000502534 560 ntAPPRIS P1 TSL 4 BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 AC096571.1-202ENST00000506634 735 ntBASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 NR1I3-226ENST00000508740 977 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 LEF1-AS1-206ENST00000512129 430 ntTSL 3 BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 AC112198.4-201ENST00000515450 351 ntBASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 IGKV2-4-201ENST00000523070 340 ntBASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 AC090589.2-201ENST00000532022 332 ntTSL 3 BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 FDPSP3-201ENST00000556903 1013 ntBASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 RN7SL237P-201ENST00000580912 287 ntBASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 FXYD1-205ENST00000588607 619 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 AC022239.4-201ENST00000602626 504 ntBASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 AL021918.1-201ENST00000603933 236 ntBASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 ACACA-232ENST00000614438 569 ntTSL 2 BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 AC016582.3-206ENST00000636547 207 ntBASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 LINC02408-201ENST00000400306 1766 ntTSL 2 BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 LL22NC03-63E9.3-201ENST00000407120 3111 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 VTI1A-202ENST00000432306 1738 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 ZNF878-201ENST00000547628 1734 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 RIPOR2-205ENST00000510784 3381 ntTSL 2 BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 AC009166.2-201ENST00000624410 2833 ntBASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 AC021231.1-201ENST00000559246 1342 ntTSL 5 BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 MAPK10-377ENST00000642006 2752 ntBASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 MED23-209ENST00000539158 1636 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 CASC19-261ENST00000641853 1638 ntBASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 CNOT4-207ENST00000451834 3507 ntAPPRIS ALT1 TSL 2 BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 SCGB2A2-201ENST00000227918 505 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 AC073842.1-201ENST00000376482 342 ntTSL 5 BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 OLA1P1-201ENST00000396387 1189 ntBASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 PPP1R17-202ENST00000409146 569 ntTSL 2 BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 RNU2-5P-201ENST00000410533 180 ntBASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 ANKRD7-202ENST00000417525 1242 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 AC064875.1-203ENST00000422996 582 ntTSL 4 BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 LDAH-208ENST00000435420 3837 ntTSL 2 BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 FO393419.1-201ENST00000443746 355 ntBASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 RPL5P9-201ENST00000448118 886 ntBASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 MTND5P8-201ENST00000449817 1083 ntBASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 AL356311.1-201ENST00000451697 258 ntTSL 3 BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 YAP1P2-201ENST00000455104 610 ntBASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 RN7SL19P-201ENST00000462522 306 ntBASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 NPSR1-208ENST00000465305 814 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 PDPN-205ENST00000487038 607 ntTSL 2 BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 C1orf112-208ENST00000496973 782 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 AC083902.1-201ENST00000508578 359 ntTSL 5 BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 LINC00967-204ENST00000518412 271 ntTSL 5 BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 AC013643.2-201ENST00000521510 584 ntTSL 4 BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 IGLVIV-66-1-201ENST00000521832 460 ntBASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 CLEC7A-208ENST00000525605 573 ntTSL 4 BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC7.57□□□□□ -1.2
TRIM48Q8IWZ4 BMPR1APS2-201ENST00000527904 1012 ntBASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms