Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 RN7SL706P-201ENST00000460079 292 ntBASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 AC234782.3-201ENST00000461229 433 ntBASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 AC108751.3-201ENST00000461814 1020 ntBASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 AC093821.1-201ENST00000503950 539 ntTSL 4 BASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 CC2D2A-207ENST00000507954 548 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 AC104123.1-203ENST00000513158 575 ntTSL 3 BASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 Y_RNA.717-201ENST00000517106 92 ntBASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 AC016152.1-201ENST00000548344 521 ntTSL 3 BASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 AC135626.1-201ENST00000556983 435 ntBASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 MTND3P12-201ENST00000559068 328 ntBASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 AC092133.1-201ENST00000565828 719 ntBASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 MTATP6P24-201ENST00000576835 677 ntBASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 AC006120.1-201ENST00000579375 546 ntBASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 AP005210.1-201ENST00000583659 544 ntTSL 2 BASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 SLC14A1-214ENST00000589700 1022 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 AP001120.4-201ENST00000590231 108 ntBASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 BNIP3P38-201ENST00000601117 544 ntBASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 AC012557.3-201ENST00000626439 255 ntBASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 AC136428.4-201ENST00000634254 1155 ntBASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 AC099654.9-201ENST00000637055 678 ntBASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 CREM-208ENST00000361599 2170 ntTSL 5 BASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 LINC01105-204ENST00000444416 2695 ntTSL 2 BASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 COLGALT2-202ENST00000367520 2325 ntTSL 2 BASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
TRIM48Q8IWZ4 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 MPEG1-201ENST00000361050 4442 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 AP000766.1-201ENST00000561746 4140 ntBASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 LINC00920-201ENST00000499966 2147 ntTSL 2 BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 LINC02111-201ENST00000505158 2312 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 WFDC8-201ENST00000289953 1069 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 DEFB124-201ENST00000317676 216 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 AL390760.1-201ENST00000366188 410 ntTSL 5 BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 MIR122-201ENST00000385044 85 ntBASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 RN7SKP39-201ENST00000410773 322 ntBASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 NFU1P1-201ENST00000413128 774 ntBASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 AL117351.1-201ENST00000438864 766 ntBASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 AL353754.1-201ENST00000440219 340 ntBASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 AL357037.1-201ENST00000454758 322 ntBASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 RN7SL213P-201ENST00000463482 317 ntBASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 RN7SL91P-201ENST00000469313 291 ntBASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 AC090835.1-201ENST00000515189 1024 ntBASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 RN7SKP253-201ENST00000516424 309 ntBASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 IGLV10-67-201ENST00000519446 325 ntBASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 AC104997.1-201ENST00000519761 717 ntBASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 IGLVIV-59-201ENST00000520218 250 ntBASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 NATP-201ENST00000523491 878 ntBASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 LINC02443-201ENST00000536518 585 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 LINC02385-201ENST00000547554 428 ntTSL 5 BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 LINC02345-202ENST00000558081 1147 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 OR4F28P-201ENST00000559128 938 ntBASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 AC244090.2-201ENST00000567614 792 ntBASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 AC136624.3-201ENST00000571660 567 ntTSL 5 BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 RN7SL25P-201ENST00000583862 260 ntBASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 OR4F8P-201ENST00000589943 937 ntBASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 AC006967.3-201ENST00000594086 1093 ntBASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 Z98949.1-208ENST00000597614 816 ntTSL 5 BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 CR589904.2-201ENST00000612533 440 ntBASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 MIR6726-201ENST00000613751 61 ntBASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 MIR6736-201ENST00000616799 59 ntBASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 AL109954.1-201ENST00000619495 557 ntTSL 4 BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 KRTAP4-1-202ENST00000620667 737 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 CRNDE-214ENST00000637011 865 ntTSL 5 BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 PARP2-204ENST00000527915 1980 ntTSL 2 BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 RBFOX2-207ENST00000414461 1706 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms