Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
SNX18Q96RF0 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SNX18Q96RF0 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC6.96□□□□□ -1.3
SNX18Q96RF0 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
SNX18Q96RF0 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SNX18Q96RF0 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.95□□□□□ -1.3
SNX18Q96RF0 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
SNX18Q96RF0 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
SNX18Q96RF0 LINC01829-202ENST00000433133 2100 ntTSL 2 BASIC6.95□□□□□ -1.3
SNX18Q96RF0 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC6.95□□□□□ -1.3
SNX18Q96RF0 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SNX18Q96RF0 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
SNX18Q96RF0 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC6.95□□□□□ -1.3
SNX18Q96RF0 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SNX18Q96RF0 IL12B-201ENST00000231228 2761 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SNX18Q96RF0 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
SNX18Q96RF0 ATM-215ENST00000530958 5718 ntTSL 2 BASIC6.95□□□□□ -1.3
SNX18Q96RF0 OR13H1-201ENST00000338616 927 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
SNX18Q96RF0 MGST3-202ENST00000367884 716 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
SNX18Q96RF0 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SNX18Q96RF0 NFU1P1-201ENST00000413128 774 ntBASIC6.95□□□□□ -1.3
SNX18Q96RF0 AL627308.2-201ENST00000420014 432 ntBASIC6.95□□□□□ -1.3
SNX18Q96RF0 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC6.95□□□□□ -1.3
SNX18Q96RF0 AC019055.1-201ENST00000432822 443 ntTSL 3 BASIC6.95□□□□□ -1.3
SNX18Q96RF0 AL512366.1-201ENST00000438919 636 ntTSL 3 BASIC6.95□□□□□ -1.3
SNX18Q96RF0 C15orf40-202ENST00000451195 518 ntTSL 3 BASIC6.95□□□□□ -1.3
SNX18Q96RF0 RN7SL508P-201ENST00000464472 303 ntBASIC6.95□□□□□ -1.3
SNX18Q96RF0 AC026254.1-201ENST00000479473 431 ntBASIC6.95□□□□□ -1.3
SNX18Q96RF0 CEACAMP3-202ENST00000483806 638 ntBASIC6.95□□□□□ -1.3
SNX18Q96RF0 LINC02428-203ENST00000513793 438 ntTSL 5 BASIC6.95□□□□□ -1.3
SNX18Q96RF0 MTND6P19-201ENST00000519399 524 ntBASIC6.95□□□□□ -1.3
SNX18Q96RF0 AC110741.1-201ENST00000520149 582 ntTSL 3 BASIC6.95□□□□□ -1.3
SNX18Q96RF0 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC6.95□□□□□ -1.3
SNX18Q96RF0 AC022639.1-201ENST00000523191 573 ntTSL 4 BASIC6.95□□□□□ -1.3
SNX18Q96RF0 ZNF345-205ENST00000526123 458 ntTSL 3 BASIC6.95□□□□□ -1.3
SNX18Q96RF0 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC6.95□□□□□ -1.3
SNX18Q96RF0 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC6.95□□□□□ -1.3
SNX18Q96RF0 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.95□□□□□ -1.3
SNX18Q96RF0 COX4I1P1-201ENST00000554239 509 ntBASIC6.95□□□□□ -1.3
SNX18Q96RF0 AL132719.1-201ENST00000554515 423 ntTSL 3 BASIC6.95□□□□□ -1.3
SNX18Q96RF0 AC027020.1-201ENST00000559349 632 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SNX18Q96RF0 LINC00520-206ENST00000560336 883 ntTSL 3 BASIC6.95□□□□□ -1.3
SNX18Q96RF0 DNM1P47-201ENST00000560757 334 ntTSL 3 BASIC6.95□□□□□ -1.3
SNX18Q96RF0 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SNX18Q96RF0 AC090079.2-201ENST00000575289 768 ntBASIC6.95□□□□□ -1.3
SNX18Q96RF0 AC010615.3-201ENST00000597319 394 ntBASIC6.95□□□□□ -1.3
SNX18Q96RF0 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC6.95□□□□□ -1.3
SNX18Q96RF0 AL109933.4-201ENST00000612111 157 ntBASIC6.95□□□□□ -1.3
SNX18Q96RF0 CCL4L2-216ENST00000620098 836 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SNX18Q96RF0 AC243960.7-201ENST00000623532 707 ntBASIC6.95□□□□□ -1.3
SNX18Q96RF0 CTSLP2-202ENST00000626319 1104 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SNX18Q96RF0 LINC02034-201ENST00000635368 760 ntTSL 5 BASIC6.95□□□□□ -1.3
SNX18Q96RF0 BCL2L11-224ENST00000639340 243 ntTSL 5 BASIC6.95□□□□□ -1.3
SNX18Q96RF0 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC6.95□□□□□ -1.3
SNX18Q96RF0 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
SNX18Q96RF0 MAPK10-365ENST00000641902 3825 ntBASIC6.95□□□□□ -1.3
SNX18Q96RF0 CCDC63-204ENST00000552694 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
SNX18Q96RF0 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.95□□□□□ -1.3
SNX18Q96RF0 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC6.95□□□□□ -1.3
SNX18Q96RF0 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SNX18Q96RF0 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC6.95□□□□□ -1.3
SNX18Q96RF0 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
SNX18Q96RF0 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
SNX18Q96RF0 AP001347.1-201ENST00000428809 1332 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SNX18Q96RF0 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
SNX18Q96RF0 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SNX18Q96RF0 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC6.94□□□□□ -1.3
SNX18Q96RF0 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SNX18Q96RF0 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
SNX18Q96RF0 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.94□□□□□ -1.3
SNX18Q96RF0 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SNX18Q96RF0 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
SNX18Q96RF0 AC009318.1-201ENST00000553105 2380 ntTSL 2 BASIC6.94□□□□□ -1.3
SNX18Q96RF0 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
SNX18Q96RF0 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.94□□□□□ -1.3
SNX18Q96RF0 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SNX18Q96RF0 SNRPG-201ENST00000272348 625 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SNX18Q96RF0 OR5T3-201ENST00000303059 1023 ntBASIC6.94□□□□□ -1.3
SNX18Q96RF0 CSNK2B-202ENST00000375866 936 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
SNX18Q96RF0 SSX9-201ENST00000376909 591 ntBASIC6.94□□□□□ -1.3
SNX18Q96RF0 MED15P8-201ENST00000411601 545 ntBASIC6.94□□□□□ -1.3
SNX18Q96RF0 AC092802.3-201ENST00000434207 420 ntTSL 3 BASIC6.94□□□□□ -1.3
SNX18Q96RF0 GRM8-206ENST00000444921 1251 ntTSL 3 BASIC6.94□□□□□ -1.3
SNX18Q96RF0 GGT3P-203ENST00000445651 368 ntTSL 2 BASIC6.94□□□□□ -1.3
SNX18Q96RF0 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC6.94□□□□□ -1.3
SNX18Q96RF0 AL357037.1-201ENST00000454758 322 ntBASIC6.94□□□□□ -1.3
SNX18Q96RF0 AC234782.3-201ENST00000461229 433 ntBASIC6.94□□□□□ -1.3
SNX18Q96RF0 RPSAP52-201ENST00000489520 1144 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SNX18Q96RF0 AC027607.1-201ENST00000503034 534 ntTSL 3 BASIC6.94□□□□□ -1.3
SNX18Q96RF0 AC138866.1-201ENST00000514522 497 ntBASIC6.94□□□□□ -1.3
SNX18Q96RF0 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC6.94□□□□□ -1.3
SNX18Q96RF0 C11orf65-203ENST00000525729 1263 ntTSL 2 BASIC6.94□□□□□ -1.3
SNX18Q96RF0 AP001636.1-201ENST00000531997 1122 ntBASIC6.94□□□□□ -1.3
SNX18Q96RF0 AP003032.2-201ENST00000533697 686 ntTSL 3 BASIC6.94□□□□□ -1.3
SNX18Q96RF0 SRMP2-201ENST00000553832 916 ntBASIC6.94□□□□□ -1.3
SNX18Q96RF0 LINC02318-202ENST00000556346 715 ntTSL 3 BASIC6.94□□□□□ -1.3
SNX18Q96RF0 AC104938.1-203ENST00000561834 546 ntTSL 3 BASIC6.94□□□□□ -1.3
SNX18Q96RF0 AC068631.1-229ENST00000599314 739 ntTSL 5 BASIC6.94□□□□□ -1.3
SNX18Q96RF0 HNRNPA1P67-201ENST00000604027 926 ntBASIC6.94□□□□□ -1.3
SNX18Q96RF0 AC005972.3-201ENST00000606304 481 ntBASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms