Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC8.08□□□□□ -1.12
UBE4BO95155 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
UBE4BO95155 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC8.08□□□□□ -1.12
UBE4BO95155 COL6A4P1-202ENST00000487147 4317 ntBASIC8.08□□□□□ -1.12
UBE4BO95155 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC8.08□□□□□ -1.12
UBE4BO95155 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
UBE4BO95155 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
UBE4BO95155 SNORA73B-201ENST00000363217 204 ntBASIC8.07□□□□□ -1.12
UBE4BO95155 AL390760.1-201ENST00000366188 410 ntTSL 5 BASIC8.07□□□□□ -1.12
UBE4BO95155 GEMIN2P2-201ENST00000418195 715 ntBASIC8.07□□□□□ -1.12
UBE4BO95155 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC8.07□□□□□ -1.12
UBE4BO95155 FTH1P10-202ENST00000430907 550 ntBASIC8.07□□□□□ -1.12
UBE4BO95155 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC8.07□□□□□ -1.12
UBE4BO95155 GTF2F2P2-201ENST00000445825 721 ntBASIC8.07□□□□□ -1.12
UBE4BO95155 AL022068.1-208ENST00000447250 1016 ntTSL 2 BASIC8.07□□□□□ -1.12
UBE4BO95155 AC066616.1-201ENST00000486795 413 ntBASIC8.07□□□□□ -1.12
UBE4BO95155 AC055733.3-201ENST00000505214 523 ntBASIC8.07□□□□□ -1.12
UBE4BO95155 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC8.07□□□□□ -1.12
UBE4BO95155 IGLV1-62-201ENST00000518003 441 ntBASIC8.07□□□□□ -1.12
UBE4BO95155 IGLVI-42-201ENST00000522485 381 ntBASIC8.07□□□□□ -1.12
UBE4BO95155 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC8.07□□□□□ -1.12
UBE4BO95155 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC8.07□□□□□ -1.12
UBE4BO95155 HIGD1AP9-201ENST00000550710 279 ntBASIC8.07□□□□□ -1.12
UBE4BO95155 BMS1P8-201ENST00000565049 1178 ntBASIC8.07□□□□□ -1.12
UBE4BO95155 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
UBE4BO95155 AC012181.2-201ENST00000570210 699 ntBASIC8.07□□□□□ -1.12
UBE4BO95155 AL583859.2-202ENST00000602311 505 ntTSL 5 BASIC8.07□□□□□ -1.12
UBE4BO95155 AC012511.1-201ENST00000608140 449 ntBASIC8.07□□□□□ -1.12
UBE4BO95155 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC8.07□□□□□ -1.12
UBE4BO95155 LINC01173-201ENST00000629370 331 ntTSL 3 BASIC8.07□□□□□ -1.12
UBE4BO95155 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
UBE4BO95155 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
UBE4BO95155 GTPBP10-202ENST00000257659 1740 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
UBE4BO95155 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC8.07□□□□□ -1.12
UBE4BO95155 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC8.07□□□□□ -1.12
UBE4BO95155 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
UBE4BO95155 OR11G2-202ENST00000641682 3786 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
UBE4BO95155 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
UBE4BO95155 AMPD1-201ENST00000369538 2392 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
UBE4BO95155 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC8.07□□□□□ -1.12
UBE4BO95155 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC8.07□□□□□ -1.12
UBE4BO95155 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC8.07□□□□□ -1.12
UBE4BO95155 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
UBE4BO95155 OSBPL9-202ENST00000371714 3352 ntAPPRIS ALT1 TSL 2 BASIC8.07□□□□□ -1.12
UBE4BO95155 ATM-215ENST00000530958 5718 ntTSL 2 BASIC8.07□□□□□ -1.12
UBE4BO95155 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC8.07□□□□□ -1.12
UBE4BO95155 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
UBE4BO95155 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC8.07□□□□□ -1.12
UBE4BO95155 AC090643.1-201ENST00000623600 3100 ntBASIC8.06□□□□□ -1.12
UBE4BO95155 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
UBE4BO95155 RNU1-38P-201ENST00000362817 144 ntBASIC8.06□□□□□ -1.12
UBE4BO95155 CNPY1-202ENST00000406197 560 ntTSL 5 BASIC8.06□□□□□ -1.12
UBE4BO95155 AL355862.1-201ENST00000412705 353 ntBASIC8.06□□□□□ -1.12
UBE4BO95155 AL390840.1-201ENST00000420303 988 ntBASIC8.06□□□□□ -1.12
UBE4BO95155 RPL5P27-201ENST00000437011 881 ntBASIC8.06□□□□□ -1.12
UBE4BO95155 AC091730.1-201ENST00000440455 692 ntTSL 3 BASIC8.06□□□□□ -1.12
UBE4BO95155 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC8.06□□□□□ -1.12
UBE4BO95155 RPL7P14-201ENST00000449851 741 ntBASIC8.06□□□□□ -1.12
UBE4BO95155 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC8.06□□□□□ -1.12
UBE4BO95155 AC120057.1-201ENST00000483947 663 ntBASIC8.06□□□□□ -1.12
UBE4BO95155 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC8.06□□□□□ -1.12
UBE4BO95155 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC8.06□□□□□ -1.12
UBE4BO95155 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC8.06□□□□□ -1.12
UBE4BO95155 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC8.06□□□□□ -1.12
UBE4BO95155 AC087257.2-201ENST00000538759 928 ntBASIC8.06□□□□□ -1.12
UBE4BO95155 KLRD1-210ENST00000543777 789 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
UBE4BO95155 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
UBE4BO95155 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC8.06□□□□□ -1.12
UBE4BO95155 AC015801.1-201ENST00000585651 153 ntBASIC8.06□□□□□ -1.12
UBE4BO95155 AL512413.1-201ENST00000606489 382 ntBASIC8.06□□□□□ -1.12
UBE4BO95155 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
UBE4BO95155 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC8.06□□□□□ -1.12
UBE4BO95155 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
UBE4BO95155 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
UBE4BO95155 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
UBE4BO95155 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
UBE4BO95155 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
UBE4BO95155 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC8.06□□□□□ -1.12
UBE4BO95155 ADGRF2-204ENST00000507065 3043 ntTSL 5 BASIC8.06□□□□□ -1.12
UBE4BO95155 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC8.06□□□□□ -1.12
UBE4BO95155 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC8.06□□□□□ -1.12
UBE4BO95155 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
UBE4BO95155 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
UBE4BO95155 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
UBE4BO95155 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
UBE4BO95155 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC8.06□□□□□ -1.12
UBE4BO95155 AC092999.1-201ENST00000624004 1924 ntBASIC8.06□□□□□ -1.12
UBE4BO95155 AC006116.1-201ENST00000587908 2171 ntBASIC8.06□□□□□ -1.12
UBE4BO95155 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
UBE4BO95155 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
UBE4BO95155 AL136298.2-201ENST00000556497 1570 ntBASIC8.05□□□□□ -1.12
UBE4BO95155 RNA5SP427-201ENST00000365323 119 ntBASIC8.05□□□□□ -1.12
UBE4BO95155 IFNA14-201ENST00000380222 990 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
UBE4BO95155 SNORA51.7-201ENST00000384171 134 ntBASIC8.05□□□□□ -1.12
UBE4BO95155 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
UBE4BO95155 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
UBE4BO95155 PPIAP30-201ENST00000415473 519 ntBASIC8.05□□□□□ -1.12
UBE4BO95155 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC8.05□□□□□ -1.12
UBE4BO95155 RPS21P1-201ENST00000434479 247 ntBASIC8.05□□□□□ -1.12
UBE4BO95155 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC8.05□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms