Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
AP3S2P59780 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
AP3S2P59780 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
AP3S2P59780 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
AP3S2P59780 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
AP3S2P59780 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
AP3S2P59780 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
AP3S2P59780 AC093829.1-201ENST00000506662 1618 ntBASIC6.28□□□□□ -1.4
AP3S2P59780 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.28□□□□□ -1.4
AP3S2P59780 AC005034.3-201ENST00000604845 1747 ntBASIC6.28□□□□□ -1.4
AP3S2P59780 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
AP3S2P59780 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
AP3S2P59780 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
AP3S2P59780 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
AP3S2P59780 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.28□□□□□ -1.4
AP3S2P59780 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
AP3S2P59780 IKZF3-205ENST00000350532 1413 ntTSL 5 BASIC6.28□□□□□ -1.4
AP3S2P59780 IKZF3-206ENST00000351680 1413 ntTSL 5 BASIC6.28□□□□□ -1.4
AP3S2P59780 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.28□□□□□ -1.4
AP3S2P59780 ZNF300P1-201ENST00000356555 1822 ntBASIC6.28□□□□□ -1.4
AP3S2P59780 SERPINB12-201ENST00000269491 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
AP3S2P59780 COQ3-202ENST00000369240 646 ntTSL 5 BASIC6.28□□□□□ -1.4
AP3S2P59780 MOSPD1-202ENST00000370779 773 ntTSL 2 BASIC6.28□□□□□ -1.4
AP3S2P59780 DPM1-203ENST00000371588 1075 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
AP3S2P59780 RNU6-316P-201ENST00000391027 107 ntBASIC6.28□□□□□ -1.4
AP3S2P59780 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
AP3S2P59780 BX470209.1-201ENST00000421297 916 ntTSL 3 BASIC6.28□□□□□ -1.4
AP3S2P59780 AL355516.1-201ENST00000422082 746 ntTSL 3 BASIC6.28□□□□□ -1.4
AP3S2P59780 RPL4P4-201ENST00000422486 1284 ntBASIC6.28□□□□□ -1.4
AP3S2P59780 TYROBP-202ENST00000424586 541 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
AP3S2P59780 AL353779.2-201ENST00000424917 308 ntBASIC6.28□□□□□ -1.4
AP3S2P59780 AC005040.1-201ENST00000437783 482 ntBASIC6.28□□□□□ -1.4
AP3S2P59780 AC012494.1-201ENST00000439259 1103 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
AP3S2P59780 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC6.28□□□□□ -1.4
AP3S2P59780 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC6.28□□□□□ -1.4
AP3S2P59780 GRM8-206ENST00000444921 1251 ntTSL 3 BASIC6.28□□□□□ -1.4
AP3S2P59780 AL135924.1-201ENST00000446146 423 ntBASIC6.28□□□□□ -1.4
AP3S2P59780 AL355537.1-201ENST00000446589 450 ntTSL 2 BASIC6.28□□□□□ -1.4
AP3S2P59780 RFC3P1-201ENST00000454568 682 ntBASIC6.28□□□□□ -1.4
AP3S2P59780 TNR-IT1-201ENST00000455447 630 ntTSL 3 BASIC6.28□□□□□ -1.4
AP3S2P59780 AP003774.3-201ENST00000457725 985 ntTSL 2 BASIC6.28□□□□□ -1.4
AP3S2P59780 KCNAB1-AS1-201ENST00000467794 456 ntTSL 2 BASIC6.28□□□□□ -1.4
AP3S2P59780 AC040975.1-201ENST00000472104 316 ntBASIC6.28□□□□□ -1.4
AP3S2P59780 LINC02082-201ENST00000484765 710 ntTSL 2 BASIC6.28□□□□□ -1.4
AP3S2P59780 LINC01096-201ENST00000501050 1263 ntTSL 2 BASIC6.28□□□□□ -1.4
AP3S2P59780 AC079768.1-201ENST00000503181 711 ntBASIC6.28□□□□□ -1.4
AP3S2P59780 CA1-219ENST00000523022 1208 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
AP3S2P59780 TRIQK-220ENST00000524037 865 ntTSL 2 BASIC6.28□□□□□ -1.4
AP3S2P59780 TBC1D21-202ENST00000535547 1005 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
AP3S2P59780 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC6.28□□□□□ -1.4
AP3S2P59780 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC6.28□□□□□ -1.4
AP3S2P59780 AC110921.1-201ENST00000577544 612 ntTSL 3 BASIC6.28□□□□□ -1.4
AP3S2P59780 AC007136.1-201ENST00000589141 199 ntBASIC6.28□□□□□ -1.4
AP3S2P59780 RPL7L1P5-201ENST00000590816 738 ntBASIC6.28□□□□□ -1.4
AP3S2P59780 AC010463.3-201ENST00000594077 500 ntBASIC6.28□□□□□ -1.4
AP3S2P59780 AC097381.3-201ENST00000608962 462 ntBASIC6.28□□□□□ -1.4
AP3S2P59780 GNPDA2-201ENST00000295448 1930 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
AP3S2P59780 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.28□□□□□ -1.4
AP3S2P59780 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
AP3S2P59780 AC069222.1-201ENST00000608028 3360 ntBASIC6.28□□□□□ -1.4
AP3S2P59780 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.28□□□□□ -1.4
AP3S2P59780 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
AP3S2P59780 AC107058.1-201ENST00000513297 1384 ntBASIC6.28□□□□□ -1.4
AP3S2P59780 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
AP3S2P59780 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
AP3S2P59780 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
AP3S2P59780 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.28□□□□□ -1.4
AP3S2P59780 OR7E11P-202ENST00000642027 1491 ntBASIC6.28□□□□□ -1.4
AP3S2P59780 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
AP3S2P59780 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
AP3S2P59780 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.4
AP3S2P59780 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.27□□□□□ -1.4
AP3S2P59780 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.4
AP3S2P59780 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
AP3S2P59780 CFI-207ENST00000618244 1345 ntTSL 5 BASIC6.27□□□□□ -1.41
AP3S2P59780 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
AP3S2P59780 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.27□□□□□ -1.41
AP3S2P59780 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
AP3S2P59780 AC007938.1-201ENST00000562524 2902 ntBASIC6.27□□□□□ -1.41
AP3S2P59780 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
AP3S2P59780 C12orf77-202ENST00000549262 1443 ntTSL 4 BASIC6.27□□□□□ -1.41
AP3S2P59780 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
AP3S2P59780 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
AP3S2P59780 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
AP3S2P59780 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC6.27□□□□□ -1.41
AP3S2P59780 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.27□□□□□ -1.41
AP3S2P59780 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
AP3S2P59780 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC6.27□□□□□ -1.41
AP3S2P59780 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC6.27□□□□□ -1.41
AP3S2P59780 RNA5SP389-201ENST00000362610 115 ntBASIC6.27□□□□□ -1.41
AP3S2P59780 RNA5SP226-201ENST00000362653 115 ntBASIC6.27□□□□□ -1.41
AP3S2P59780 TRBV7-5-201ENST00000390382 345 ntBASIC6.27□□□□□ -1.41
AP3S2P59780 TOMM6-201ENST00000398881 595 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
AP3S2P59780 LINC00316-201ENST00000416722 455 ntTSL 2 BASIC6.27□□□□□ -1.41
AP3S2P59780 AC010983.1-201ENST00000418387 1028 ntTSL 5 BASIC6.27□□□□□ -1.41
AP3S2P59780 OR10J1-201ENST00000423932 1090 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
AP3S2P59780 AC073342.1-201ENST00000427392 592 ntTSL 5 BASIC6.27□□□□□ -1.41
AP3S2P59780 NPM1P25-201ENST00000429734 854 ntBASIC6.27□□□□□ -1.41
AP3S2P59780 RPL35P8-201ENST00000433284 337 ntBASIC6.27□□□□□ -1.41
AP3S2P59780 AJ006995.1-201ENST00000433344 572 ntTSL 3 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms