Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC7.03□□□□□ -1.28
SNX18Q96RF0 NBPF8-201ENST00000583271 5330 ntBASIC7.03□□□□□ -1.28
SNX18Q96RF0 CKAP2-203ENST00000378037 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
SNX18Q96RF0 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SNX18Q96RF0 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SNX18Q96RF0 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SNX18Q96RF0 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
SNX18Q96RF0 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SNX18Q96RF0 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
SNX18Q96RF0 FAM122C-202ENST00000370785 1344 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.28
SNX18Q96RF0 GLRA3-202ENST00000340217 3065 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SNX18Q96RF0 AC020549.1-201ENST00000536916 1440 ntBASIC7.02□□□□□ -1.29
SNX18Q96RF0 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SNX18Q96RF0 AC110716.2-201ENST00000563865 3945 ntBASIC7.02□□□□□ -1.29
SNX18Q96RF0 SLC7A8-206ENST00000469263 3557 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SNX18Q96RF0 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SNX18Q96RF0 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SNX18Q96RF0 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
SNX18Q96RF0 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SNX18Q96RF0 AL589826.1-201ENST00000340697 249 ntBASIC7.02□□□□□ -1.29
SNX18Q96RF0 SNORA71D-201ENST00000363484 134 ntBASIC7.02□□□□□ -1.29
SNX18Q96RF0 AC093392.1-201ENST00000366280 340 ntBASIC7.02□□□□□ -1.29
SNX18Q96RF0 RNA5SP185-201ENST00000390963 114 ntBASIC7.02□□□□□ -1.29
SNX18Q96RF0 RNA5SP23-201ENST00000391006 105 ntBASIC7.02□□□□□ -1.29
SNX18Q96RF0 S100A13-202ENST00000392622 547 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
SNX18Q96RF0 IL6-202ENST00000401630 765 ntTSL 5 BASIC7.02□□□□□ -1.29
SNX18Q96RF0 SLC2A11-205ENST00000403208 564 ntTSL 4 BASIC7.02□□□□□ -1.29
SNX18Q96RF0 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC7.02□□□□□ -1.29
SNX18Q96RF0 MTND2P12-201ENST00000417560 1252 ntBASIC7.02□□□□□ -1.29
SNX18Q96RF0 ENTPD3-AS1-201ENST00000420850 791 ntTSL 2 BASIC7.02□□□□□ -1.29
SNX18Q96RF0 FTH1P5-201ENST00000425761 545 ntBASIC7.02□□□□□ -1.29
SNX18Q96RF0 UBE2V2P1-201ENST00000434717 398 ntBASIC7.02□□□□□ -1.29
SNX18Q96RF0 AL954705.1-201ENST00000435277 559 ntBASIC7.02□□□□□ -1.29
SNX18Q96RF0 AC007790.1-201ENST00000439081 782 ntBASIC7.02□□□□□ -1.29
SNX18Q96RF0 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC7.02□□□□□ -1.29
SNX18Q96RF0 AL158168.1-201ENST00000443282 357 ntTSL 3 BASIC7.02□□□□□ -1.29
SNX18Q96RF0 NUTF2P4-201ENST00000458353 381 ntBASIC7.02□□□□□ -1.29
SNX18Q96RF0 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC7.02□□□□□ -1.29
SNX18Q96RF0 AC116353.1-201ENST00000489727 316 ntBASIC7.02□□□□□ -1.29
SNX18Q96RF0 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC7.02□□□□□ -1.29
SNX18Q96RF0 AC093297.2-201ENST00000503452 738 ntTSL 2 BASIC7.02□□□□□ -1.29
SNX18Q96RF0 AC098583.2-201ENST00000504151 372 ntBASIC7.02□□□□□ -1.29
SNX18Q96RF0 RASGRF2-AS1-201ENST00000505107 665 ntTSL 3 BASIC7.02□□□□□ -1.29
SNX18Q96RF0 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SNX18Q96RF0 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
SNX18Q96RF0 PSMA6-202ENST00000540871 912 ntTSL 2 BASIC7.02□□□□□ -1.29
SNX18Q96RF0 TSPAN8-203ENST00000546561 1168 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SNX18Q96RF0 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC7.02□□□□□ -1.29
SNX18Q96RF0 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC7.02□□□□□ -1.29
SNX18Q96RF0 OR4N1P-201ENST00000554847 949 ntBASIC7.02□□□□□ -1.29
SNX18Q96RF0 AC005230.1-201ENST00000555418 285 ntBASIC7.02□□□□□ -1.29
SNX18Q96RF0 LINC02330-201ENST00000557784 555 ntTSL 4 BASIC7.02□□□□□ -1.29
SNX18Q96RF0 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC7.02□□□□□ -1.29
SNX18Q96RF0 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC7.02□□□□□ -1.29
SNX18Q96RF0 AC114546.2-201ENST00000560683 477 ntTSL 3 BASIC7.02□□□□□ -1.29
SNX18Q96RF0 AC034105.2-201ENST00000561866 238 ntBASIC7.02□□□□□ -1.29
SNX18Q96RF0 AC007861.1-201ENST00000576671 674 ntTSL 5 BASIC7.02□□□□□ -1.29
SNX18Q96RF0 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC7.02□□□□□ -1.29
SNX18Q96RF0 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.02□□□□□ -1.29
SNX18Q96RF0 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC7.02□□□□□ -1.29
SNX18Q96RF0 AC087645.1-201ENST00000588528 291 ntBASIC7.02□□□□□ -1.29
SNX18Q96RF0 ZSCAN26-203ENST00000611552 1030 ntTSL 2 BASIC7.02□□□□□ -1.29
SNX18Q96RF0 AC239809.3-218ENST00000616018 1023 ntTSL 5 BASIC7.02□□□□□ -1.29
SNX18Q96RF0 RN7SL820P-201ENST00000616437 299 ntBASIC7.02□□□□□ -1.29
SNX18Q96RF0 CT45A9-202ENST00000620704 1010 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
SNX18Q96RF0 AC073592.7-201ENST00000623659 507 ntBASIC7.02□□□□□ -1.29
SNX18Q96RF0 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC7.02□□□□□ -1.29
SNX18Q96RF0 RGS7-202ENST00000366563 2206 ntTSL 5 BASIC7.02□□□□□ -1.29
SNX18Q96RF0 AC016930.1-201ENST00000468766 2205 ntBASIC7.02□□□□□ -1.29
SNX18Q96RF0 RAB11A-209ENST00000569896 1396 ntTSL 2 BASIC7.02□□□□□ -1.29
SNX18Q96RF0 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
SNX18Q96RF0 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
SNX18Q96RF0 ALG8-221ENST00000615266 1469 ntTSL 5 BASIC7.02□□□□□ -1.29
SNX18Q96RF0 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC7.02□□□□□ -1.29
SNX18Q96RF0 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.02□□□□□ -1.29
SNX18Q96RF0 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
SNX18Q96RF0 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
SNX18Q96RF0 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.02□□□□□ -1.29
SNX18Q96RF0 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SNX18Q96RF0 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SNX18Q96RF0 HSD11B1-202ENST00000367027 1405 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SNX18Q96RF0 AF064858.1-201ENST00000417335 1412 ntTSL 5 BASIC7.01□□□□□ -1.29
SNX18Q96RF0 AC104078.1-201ENST00000499292 1448 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SNX18Q96RF0 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SNX18Q96RF0 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SNX18Q96RF0 TATDN2P1-201ENST00000443767 2331 ntBASIC7.01□□□□□ -1.29
SNX18Q96RF0 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.01□□□□□ -1.29
SNX18Q96RF0 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SNX18Q96RF0 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SNX18Q96RF0 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SNX18Q96RF0 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
SNX18Q96RF0 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
SNX18Q96RF0 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SNX18Q96RF0 NF1P8-201ENST00000415351 1461 ntBASIC7.01□□□□□ -1.29
SNX18Q96RF0 GLRX-202ENST00000379979 1366 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SNX18Q96RF0 AC106800.1-201ENST00000501221 1362 ntBASIC7.01□□□□□ -1.29
SNX18Q96RF0 AL591543.1-202ENST00000642095 4149 ntBASIC7.01□□□□□ -1.29
SNX18Q96RF0 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC7.01□□□□□ -1.29
SNX18Q96RF0 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
SNX18Q96RF0 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms