Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VPS9D1Q9Y2B5 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.95■□□□□ 0.78
VPS9D1Q9Y2B5 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
VPS9D1Q9Y2B5 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.95■□□□□ 0.78
VPS9D1Q9Y2B5 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.95■□□□□ 0.78
VPS9D1Q9Y2B5 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS9D1Q9Y2B5 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS9D1Q9Y2B5 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.95■□□□□ 0.78
VPS9D1Q9Y2B5 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS9D1Q9Y2B5 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS9D1Q9Y2B5 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS9D1Q9Y2B5 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.94■□□□□ 0.78
VPS9D1Q9Y2B5 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS9D1Q9Y2B5 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.94■□□□□ 0.78
VPS9D1Q9Y2B5 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VPS9D1Q9Y2B5 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS9D1Q9Y2B5 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VPS9D1Q9Y2B5 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS9D1Q9Y2B5 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS9D1Q9Y2B5 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.94■□□□□ 0.78
VPS9D1Q9Y2B5 AL355472.2-201ENST00000422958 438 ntBASIC19.94■□□□□ 0.78
VPS9D1Q9Y2B5 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.94■□□□□ 0.78
VPS9D1Q9Y2B5 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS9D1Q9Y2B5 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.94■□□□□ 0.78
VPS9D1Q9Y2B5 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.94■□□□□ 0.78
VPS9D1Q9Y2B5 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS9D1Q9Y2B5 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS9D1Q9Y2B5 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.94■□□□□ 0.78
VPS9D1Q9Y2B5 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
VPS9D1Q9Y2B5 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.94■□□□□ 0.78
VPS9D1Q9Y2B5 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS9D1Q9Y2B5 KRT8P20-201ENST00000423953 1409 ntBASIC19.93■□□□□ 0.78
VPS9D1Q9Y2B5 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VPS9D1Q9Y2B5 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VPS9D1Q9Y2B5 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS9D1Q9Y2B5 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
VPS9D1Q9Y2B5 AIRN-201ENST00000601203 4374 ntBASIC19.93■□□□□ 0.78
VPS9D1Q9Y2B5 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS9D1Q9Y2B5 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.93■□□□□ 0.78
VPS9D1Q9Y2B5 HLA-G-202ENST00000376815 851 ntBASIC19.93■□□□□ 0.78
VPS9D1Q9Y2B5 HLA-G-203ENST00000376818 1127 ntBASIC19.93■□□□□ 0.78
VPS9D1Q9Y2B5 LSM12P1-201ENST00000411836 588 ntBASIC19.93■□□□□ 0.78
VPS9D1Q9Y2B5 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.93■□□□□ 0.78
VPS9D1Q9Y2B5 AC093787.1-201ENST00000450396 207 ntBASIC19.93■□□□□ 0.78
VPS9D1Q9Y2B5 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.93■□□□□ 0.78
VPS9D1Q9Y2B5 C2orf69P4-201ENST00000565394 541 ntBASIC19.93■□□□□ 0.78
VPS9D1Q9Y2B5 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.93■□□□□ 0.78
VPS9D1Q9Y2B5 AL031963.3-201ENST00000606441 850 ntBASIC19.93■□□□□ 0.78
VPS9D1Q9Y2B5 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.93■□□□□ 0.78
VPS9D1Q9Y2B5 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
VPS9D1Q9Y2B5 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS9D1Q9Y2B5 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS9D1Q9Y2B5 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VPS9D1Q9Y2B5 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS9D1Q9Y2B5 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
VPS9D1Q9Y2B5 SLC25A24-204ENST00000569674 2357 ntBASIC19.93■□□□□ 0.78
VPS9D1Q9Y2B5 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS9D1Q9Y2B5 KRT8P17-201ENST00000453110 1448 ntBASIC19.93■□□□□ 0.78
VPS9D1Q9Y2B5 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VPS9D1Q9Y2B5 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
VPS9D1Q9Y2B5 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
VPS9D1Q9Y2B5 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS9D1Q9Y2B5 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VPS9D1Q9Y2B5 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VPS9D1Q9Y2B5 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.92■□□□□ 0.78
VPS9D1Q9Y2B5 PTBP1P-201ENST00000554374 1601 ntBASIC19.92■□□□□ 0.78
VPS9D1Q9Y2B5 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
VPS9D1Q9Y2B5 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
VPS9D1Q9Y2B5 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.92■□□□□ 0.78
VPS9D1Q9Y2B5 MIR663A-201ENST00000385250 93 ntBASIC19.92■□□□□ 0.78
VPS9D1Q9Y2B5 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS9D1Q9Y2B5 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS9D1Q9Y2B5 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
VPS9D1Q9Y2B5 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VPS9D1Q9Y2B5 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
VPS9D1Q9Y2B5 KRT16P6-202ENST00000425692 1426 ntBASIC19.92■□□□□ 0.78
VPS9D1Q9Y2B5 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS9D1Q9Y2B5 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS9D1Q9Y2B5 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VPS9D1Q9Y2B5 MKRN4P-201ENST00000444706 1521 ntBASIC19.92■□□□□ 0.78
VPS9D1Q9Y2B5 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS9D1Q9Y2B5 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS9D1Q9Y2B5 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VPS9D1Q9Y2B5 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VPS9D1Q9Y2B5 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
VPS9D1Q9Y2B5 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS9D1Q9Y2B5 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.91■□□□□ 0.78
VPS9D1Q9Y2B5 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VPS9D1Q9Y2B5 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
VPS9D1Q9Y2B5 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS9D1Q9Y2B5 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS9D1Q9Y2B5 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS9D1Q9Y2B5 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.91■□□□□ 0.78
VPS9D1Q9Y2B5 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS9D1Q9Y2B5 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS9D1Q9Y2B5 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.91■□□□□ 0.78
VPS9D1Q9Y2B5 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.91■□□□□ 0.78
VPS9D1Q9Y2B5 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.91■□□□□ 0.78
VPS9D1Q9Y2B5 AC105036.2-201ENST00000569468 176 ntBASIC19.91■□□□□ 0.78
VPS9D1Q9Y2B5 RAP2CP1-201ENST00000605103 478 ntBASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms