Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.23■□□□□ 0.99
PCDHGC3Q9UN70 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGC3Q9UN70 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.23■□□□□ 0.99
PCDHGC3Q9UN70 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGC3Q9UN70 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGC3Q9UN70 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGC3Q9UN70 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGC3Q9UN70 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGC3Q9UN70 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.23■□□□□ 0.99
PCDHGC3Q9UN70 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
PCDHGC3Q9UN70 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGC3Q9UN70 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGC3Q9UN70 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.22■□□□□ 0.99
PCDHGC3Q9UN70 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.22■□□□□ 0.99
PCDHGC3Q9UN70 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGC3Q9UN70 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.22■□□□□ 0.99
PCDHGC3Q9UN70 AC098934.4-201ENST00000564127 592 ntBASIC21.22■□□□□ 0.99
PCDHGC3Q9UN70 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.22■□□□□ 0.99
PCDHGC3Q9UN70 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
PCDHGC3Q9UN70 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.22■□□□□ 0.99
PCDHGC3Q9UN70 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGC3Q9UN70 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGC3Q9UN70 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
PCDHGC3Q9UN70 AL691432.2-201ENST00000607222 2038 ntBASIC21.22■□□□□ 0.99
PCDHGC3Q9UN70 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGC3Q9UN70 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.22■□□□□ 0.99
PCDHGC3Q9UN70 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGC3Q9UN70 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGC3Q9UN70 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.22■□□□□ 0.99
PCDHGC3Q9UN70 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.22■□□□□ 0.99
PCDHGC3Q9UN70 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGC3Q9UN70 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGC3Q9UN70 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGC3Q9UN70 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
PCDHGC3Q9UN70 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.21■□□□□ 0.99
PCDHGC3Q9UN70 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGC3Q9UN70 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGC3Q9UN70 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.21■□□□□ 0.99
PCDHGC3Q9UN70 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGC3Q9UN70 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGC3Q9UN70 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
PCDHGC3Q9UN70 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDHGC3Q9UN70 AC097658.1-201ENST00000475555 843 ntBASIC21.21■□□□□ 0.99
PCDHGC3Q9UN70 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGC3Q9UN70 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.21■□□□□ 0.99
PCDHGC3Q9UN70 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGC3Q9UN70 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGC3Q9UN70 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDHGC3Q9UN70 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGC3Q9UN70 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGC3Q9UN70 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.2■□□□□ 0.99
PCDHGC3Q9UN70 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
PCDHGC3Q9UN70 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
PCDHGC3Q9UN70 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGC3Q9UN70 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.2■□□□□ 0.98
PCDHGC3Q9UN70 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGC3Q9UN70 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.2■□□□□ 0.98
PCDHGC3Q9UN70 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
PCDHGC3Q9UN70 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGC3Q9UN70 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.2■□□□□ 0.98
PCDHGC3Q9UN70 AC069152.1-201ENST00000438030 544 ntBASIC21.2■□□□□ 0.98
PCDHGC3Q9UN70 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.2■□□□□ 0.98
PCDHGC3Q9UN70 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
PCDHGC3Q9UN70 AC133041.1-202ENST00000642053 222 ntBASIC21.2■□□□□ 0.98
PCDHGC3Q9UN70 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGC3Q9UN70 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGC3Q9UN70 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGC3Q9UN70 KRT16P6-202ENST00000425692 1426 ntBASIC21.2■□□□□ 0.98
PCDHGC3Q9UN70 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGC3Q9UN70 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGC3Q9UN70 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGC3Q9UN70 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.19■□□□□ 0.98
PCDHGC3Q9UN70 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
PCDHGC3Q9UN70 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGC3Q9UN70 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGC3Q9UN70 HLA-L-209ENST00000420110 1011 ntBASIC21.19■□□□□ 0.98
PCDHGC3Q9UN70 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.19■□□□□ 0.98
PCDHGC3Q9UN70 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.19■□□□□ 0.98
PCDHGC3Q9UN70 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.19■□□□□ 0.98
PCDHGC3Q9UN70 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGC3Q9UN70 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGC3Q9UN70 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.19■□□□□ 0.98
PCDHGC3Q9UN70 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGC3Q9UN70 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGC3Q9UN70 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGC3Q9UN70 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.18■□□□□ 0.98
PCDHGC3Q9UN70 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGC3Q9UN70 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGC3Q9UN70 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGC3Q9UN70 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGC3Q9UN70 ID1-201ENST00000376105 1233 ntBASIC21.18■□□□□ 0.98
PCDHGC3Q9UN70 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGC3Q9UN70 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.18■□□□□ 0.98
PCDHGC3Q9UN70 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.18■□□□□ 0.98
PCDHGC3Q9UN70 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGC3Q9UN70 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
PCDHGC3Q9UN70 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDHGC3Q9UN70 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
PCDHGC3Q9UN70 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.18■□□□□ 0.98
PCDHGC3Q9UN70 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms