Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
BLOC1S4Q9NUP1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
BLOC1S4Q9NUP1 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC22.39■■□□□ 1.17
BLOC1S4Q9NUP1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
BLOC1S4Q9NUP1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
BLOC1S4Q9NUP1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC22.38■■□□□ 1.17
BLOC1S4Q9NUP1 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
BLOC1S4Q9NUP1 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
BLOC1S4Q9NUP1 AC073210.2-201ENST00000430369 194 ntBASIC22.38■■□□□ 1.17
BLOC1S4Q9NUP1 RHEB-204ENST00000472642 900 ntTSL 3 BASIC22.38■■□□□ 1.17
BLOC1S4Q9NUP1 AC023632.3-201ENST00000521633 145 ntBASIC22.38■■□□□ 1.17
BLOC1S4Q9NUP1 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
BLOC1S4Q9NUP1 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
BLOC1S4Q9NUP1 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
BLOC1S4Q9NUP1 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
BLOC1S4Q9NUP1 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC22.38■■□□□ 1.17
BLOC1S4Q9NUP1 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC22.38■■□□□ 1.17
BLOC1S4Q9NUP1 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
BLOC1S4Q9NUP1 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
BLOC1S4Q9NUP1 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC22.37■■□□□ 1.17
BLOC1S4Q9NUP1 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC22.37■■□□□ 1.17
BLOC1S4Q9NUP1 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
BLOC1S4Q9NUP1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC22.37■■□□□ 1.17
BLOC1S4Q9NUP1 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
BLOC1S4Q9NUP1 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC22.37■■□□□ 1.17
BLOC1S4Q9NUP1 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC22.37■■□□□ 1.17
BLOC1S4Q9NUP1 AC083880.1-201ENST00000608266 535 ntBASIC22.37■■□□□ 1.17
BLOC1S4Q9NUP1 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC22.37■■□□□ 1.17
BLOC1S4Q9NUP1 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
BLOC1S4Q9NUP1 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
BLOC1S4Q9NUP1 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
BLOC1S4Q9NUP1 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
BLOC1S4Q9NUP1 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
BLOC1S4Q9NUP1 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
BLOC1S4Q9NUP1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC22.36■■□□□ 1.17
BLOC1S4Q9NUP1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
BLOC1S4Q9NUP1 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
BLOC1S4Q9NUP1 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
BLOC1S4Q9NUP1 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
BLOC1S4Q9NUP1 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
BLOC1S4Q9NUP1 ID1-201ENST00000376105 1233 ntBASIC22.36■■□□□ 1.17
BLOC1S4Q9NUP1 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC22.36■■□□□ 1.17
BLOC1S4Q9NUP1 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
BLOC1S4Q9NUP1 KRT8P20-201ENST00000423953 1409 ntBASIC22.36■■□□□ 1.17
BLOC1S4Q9NUP1 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC22.36■■□□□ 1.17
BLOC1S4Q9NUP1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
BLOC1S4Q9NUP1 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
BLOC1S4Q9NUP1 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
BLOC1S4Q9NUP1 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
BLOC1S4Q9NUP1 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
BLOC1S4Q9NUP1 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
BLOC1S4Q9NUP1 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
BLOC1S4Q9NUP1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
BLOC1S4Q9NUP1 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
BLOC1S4Q9NUP1 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC22.35■■□□□ 1.17
BLOC1S4Q9NUP1 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
BLOC1S4Q9NUP1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
BLOC1S4Q9NUP1 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
BLOC1S4Q9NUP1 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
BLOC1S4Q9NUP1 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC22.35■■□□□ 1.17
BLOC1S4Q9NUP1 MFF-205ENST00000354503 1085 ntTSL 2 BASIC22.35■■□□□ 1.17
BLOC1S4Q9NUP1 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
BLOC1S4Q9NUP1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
BLOC1S4Q9NUP1 AC069152.1-201ENST00000438030 544 ntBASIC22.35■■□□□ 1.17
BLOC1S4Q9NUP1 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC22.35■■□□□ 1.17
BLOC1S4Q9NUP1 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
BLOC1S4Q9NUP1 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC22.35■■□□□ 1.17
BLOC1S4Q9NUP1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC22.35■■□□□ 1.17
BLOC1S4Q9NUP1 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC22.35■■□□□ 1.17
BLOC1S4Q9NUP1 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
BLOC1S4Q9NUP1 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC22.35■■□□□ 1.17
BLOC1S4Q9NUP1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC22.35■■□□□ 1.17
BLOC1S4Q9NUP1 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
BLOC1S4Q9NUP1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
BLOC1S4Q9NUP1 AFG3L1P-217ENST00000557444 2447 ntBASIC22.35■■□□□ 1.17
BLOC1S4Q9NUP1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
BLOC1S4Q9NUP1 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
BLOC1S4Q9NUP1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
BLOC1S4Q9NUP1 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
BLOC1S4Q9NUP1 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC22.34■■□□□ 1.17
BLOC1S4Q9NUP1 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
BLOC1S4Q9NUP1 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
BLOC1S4Q9NUP1 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC22.34■■□□□ 1.17
BLOC1S4Q9NUP1 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC22.34■■□□□ 1.17
BLOC1S4Q9NUP1 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC22.34■■□□□ 1.17
BLOC1S4Q9NUP1 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC22.34■■□□□ 1.17
BLOC1S4Q9NUP1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
BLOC1S4Q9NUP1 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
BLOC1S4Q9NUP1 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC22.34■■□□□ 1.17
BLOC1S4Q9NUP1 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
BLOC1S4Q9NUP1 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
BLOC1S4Q9NUP1 MOK-225ENST00000522867 1883 ntTSL 5 BASIC22.33■■□□□ 1.17
BLOC1S4Q9NUP1 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
BLOC1S4Q9NUP1 AC097658.1-201ENST00000475555 843 ntBASIC22.33■■□□□ 1.17
BLOC1S4Q9NUP1 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
BLOC1S4Q9NUP1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC22.33■■□□□ 1.17
BLOC1S4Q9NUP1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
BLOC1S4Q9NUP1 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
BLOC1S4Q9NUP1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
BLOC1S4Q9NUP1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms