Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.83■□□□□ 0.6
KLHL1Q9NR64 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.83■□□□□ 0.6
KLHL1Q9NR64 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.83■□□□□ 0.6
KLHL1Q9NR64 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
KLHL1Q9NR64 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
KLHL1Q9NR64 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KLHL1Q9NR64 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
KLHL1Q9NR64 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
KLHL1Q9NR64 CYP21A1P-202ENST00000354927 1481 ntBASIC18.83■□□□□ 0.6
KLHL1Q9NR64 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KLHL1Q9NR64 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KLHL1Q9NR64 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.82■□□□□ 0.6
KLHL1Q9NR64 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.82■□□□□ 0.6
KLHL1Q9NR64 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KLHL1Q9NR64 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
KLHL1Q9NR64 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.82■□□□□ 0.6
KLHL1Q9NR64 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KLHL1Q9NR64 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.82■□□□□ 0.6
KLHL1Q9NR64 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
KLHL1Q9NR64 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.82■□□□□ 0.6
KLHL1Q9NR64 UNC93B5-201ENST00000530315 699 ntBASIC18.82■□□□□ 0.6
KLHL1Q9NR64 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KLHL1Q9NR64 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.82■□□□□ 0.6
KLHL1Q9NR64 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KLHL1Q9NR64 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
KLHL1Q9NR64 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.82■□□□□ 0.6
KLHL1Q9NR64 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
KLHL1Q9NR64 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KLHL1Q9NR64 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KLHL1Q9NR64 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
KLHL1Q9NR64 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.81■□□□□ 0.6
KLHL1Q9NR64 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
KLHL1Q9NR64 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KLHL1Q9NR64 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KLHL1Q9NR64 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
KLHL1Q9NR64 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KLHL1Q9NR64 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
KLHL1Q9NR64 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KLHL1Q9NR64 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KLHL1Q9NR64 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.81■□□□□ 0.6
KLHL1Q9NR64 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KLHL1Q9NR64 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KLHL1Q9NR64 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KLHL1Q9NR64 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KLHL1Q9NR64 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KLHL1Q9NR64 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.81■□□□□ 0.6
KLHL1Q9NR64 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
KLHL1Q9NR64 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
KLHL1Q9NR64 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.81■□□□□ 0.6
KLHL1Q9NR64 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.81■□□□□ 0.6
KLHL1Q9NR64 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.81■□□□□ 0.6
KLHL1Q9NR64 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.81■□□□□ 0.6
KLHL1Q9NR64 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
KLHL1Q9NR64 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KLHL1Q9NR64 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.81■□□□□ 0.6
KLHL1Q9NR64 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
KLHL1Q9NR64 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KLHL1Q9NR64 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KLHL1Q9NR64 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
KLHL1Q9NR64 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
KLHL1Q9NR64 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KLHL1Q9NR64 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
KLHL1Q9NR64 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KLHL1Q9NR64 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KLHL1Q9NR64 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.8■□□□□ 0.6
KLHL1Q9NR64 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
KLHL1Q9NR64 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.8■□□□□ 0.6
KLHL1Q9NR64 AC026366.1-201ENST00000488803 879 ntBASIC18.8■□□□□ 0.6
KLHL1Q9NR64 AP003097.1-201ENST00000530657 1135 ntBASIC18.8■□□□□ 0.6
KLHL1Q9NR64 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KLHL1Q9NR64 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.8■□□□□ 0.6
KLHL1Q9NR64 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KLHL1Q9NR64 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
KLHL1Q9NR64 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
KLHL1Q9NR64 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KLHL1Q9NR64 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KLHL1Q9NR64 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.8■□□□□ 0.6
KLHL1Q9NR64 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KLHL1Q9NR64 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
KLHL1Q9NR64 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.8■□□□□ 0.6
KLHL1Q9NR64 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KLHL1Q9NR64 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.79■□□□□ 0.6
KLHL1Q9NR64 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
KLHL1Q9NR64 LINC01006-201ENST00000333319 2292 ntBASIC18.79■□□□□ 0.6
KLHL1Q9NR64 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KLHL1Q9NR64 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KLHL1Q9NR64 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KLHL1Q9NR64 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.79■□□□□ 0.6
KLHL1Q9NR64 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KLHL1Q9NR64 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.79■□□□□ 0.6
KLHL1Q9NR64 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KLHL1Q9NR64 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
KLHL1Q9NR64 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.79■□□□□ 0.6
KLHL1Q9NR64 AC128676.1-201ENST00000454392 318 ntBASIC18.79■□□□□ 0.6
KLHL1Q9NR64 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KLHL1Q9NR64 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.79■□□□□ 0.6
KLHL1Q9NR64 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
KLHL1Q9NR64 AC093827.2-201ENST00000512654 315 ntBASIC18.79■□□□□ 0.6
KLHL1Q9NR64 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.79■□□□□ 0.6
KLHL1Q9NR64 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms