Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC25.32■■□□□ 1.64
CHMP4BQ9H444 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC25.32■■□□□ 1.64
CHMP4BQ9H444 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CHMP4BQ9H444 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC25.32■■□□□ 1.64
CHMP4BQ9H444 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC25.32■■□□□ 1.64
CHMP4BQ9H444 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC25.31■■□□□ 1.64
CHMP4BQ9H444 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CHMP4BQ9H444 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CHMP4BQ9H444 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CHMP4BQ9H444 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CHMP4BQ9H444 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC25.31■■□□□ 1.64
CHMP4BQ9H444 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC25.31■■□□□ 1.64
CHMP4BQ9H444 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC25.31■■□□□ 1.64
CHMP4BQ9H444 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CHMP4BQ9H444 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
CHMP4BQ9H444 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC25.31■■□□□ 1.64
CHMP4BQ9H444 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
CHMP4BQ9H444 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC25.31■■□□□ 1.64
CHMP4BQ9H444 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
CHMP4BQ9H444 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CHMP4BQ9H444 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CHMP4BQ9H444 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
CHMP4BQ9H444 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
CHMP4BQ9H444 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC25.3■■□□□ 1.64
CHMP4BQ9H444 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
CHMP4BQ9H444 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
CHMP4BQ9H444 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
CHMP4BQ9H444 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CHMP4BQ9H444 MIR663A-201ENST00000385250 93 ntBASIC25.3■■□□□ 1.64
CHMP4BQ9H444 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC25.3■■□□□ 1.64
CHMP4BQ9H444 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC25.3■■□□□ 1.64
CHMP4BQ9H444 KRT17P1-201ENST00000399211 1546 ntBASIC25.3■■□□□ 1.64
CHMP4BQ9H444 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
CHMP4BQ9H444 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
CHMP4BQ9H444 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
CHMP4BQ9H444 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
CHMP4BQ9H444 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CHMP4BQ9H444 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CHMP4BQ9H444 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CHMP4BQ9H444 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CHMP4BQ9H444 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC25.29■■□□□ 1.64
CHMP4BQ9H444 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC25.29■■□□□ 1.64
CHMP4BQ9H444 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC25.29■■□□□ 1.64
CHMP4BQ9H444 AL050303.2-201ENST00000619798 666 ntBASIC25.29■■□□□ 1.64
CHMP4BQ9H444 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CHMP4BQ9H444 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC25.29■■□□□ 1.64
CHMP4BQ9H444 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CHMP4BQ9H444 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
CHMP4BQ9H444 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
CHMP4BQ9H444 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CHMP4BQ9H444 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
CHMP4BQ9H444 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CHMP4BQ9H444 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC25.28■■□□□ 1.64
CHMP4BQ9H444 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
CHMP4BQ9H444 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CHMP4BQ9H444 GOLGA2P11-201ENST00000562660 1621 ntBASIC25.28■■□□□ 1.64
CHMP4BQ9H444 TMEM179-206ENST00000616017 1645 ntBASIC25.28■■□□□ 1.64
CHMP4BQ9H444 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CHMP4BQ9H444 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC25.28■■□□□ 1.64
CHMP4BQ9H444 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC25.28■■□□□ 1.64
CHMP4BQ9H444 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC25.28■■□□□ 1.64
CHMP4BQ9H444 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC25.28■■□□□ 1.64
CHMP4BQ9H444 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
CHMP4BQ9H444 AL121832.2-201ENST00000610979 668 ntBASIC25.28■■□□□ 1.64
CHMP4BQ9H444 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CHMP4BQ9H444 SLC25A24-204ENST00000569674 2357 ntBASIC25.28■■□□□ 1.64
CHMP4BQ9H444 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC25.28■■□□□ 1.64
CHMP4BQ9H444 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CHMP4BQ9H444 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CHMP4BQ9H444 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
CHMP4BQ9H444 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
CHMP4BQ9H444 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CHMP4BQ9H444 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
CHMP4BQ9H444 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CHMP4BQ9H444 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC25.27■■□□□ 1.64
CHMP4BQ9H444 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHMP4BQ9H444 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CHMP4BQ9H444 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CHMP4BQ9H444 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHMP4BQ9H444 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC25.27■■□□□ 1.64
CHMP4BQ9H444 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
CHMP4BQ9H444 CROCCP5-201ENST00000436658 830 ntBASIC25.27■■□□□ 1.64
CHMP4BQ9H444 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC25.27■■□□□ 1.64
CHMP4BQ9H444 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHMP4BQ9H444 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC25.27■■□□□ 1.64
CHMP4BQ9H444 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC25.27■■□□□ 1.64
CHMP4BQ9H444 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC25.27■■□□□ 1.64
CHMP4BQ9H444 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CHMP4BQ9H444 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
CHMP4BQ9H444 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHMP4BQ9H444 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHMP4BQ9H444 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CHMP4BQ9H444 AL391422.3-201ENST00000603791 2761 ntBASIC25.27■■□□□ 1.64
CHMP4BQ9H444 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC25.27■■□□□ 1.64
CHMP4BQ9H444 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CHMP4BQ9H444 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC25.26■■□□□ 1.63
CHMP4BQ9H444 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
CHMP4BQ9H444 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CHMP4BQ9H444 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CHMP4BQ9H444 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms