Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
POLR2J3Q9H1A7 DPP3P2-201ENST00000416030 1696 ntBASIC18.51■□□□□ 0.55
POLR2J3Q9H1A7 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.51■□□□□ 0.55
POLR2J3Q9H1A7 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
POLR2J3Q9H1A7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.51■□□□□ 0.55
POLR2J3Q9H1A7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
POLR2J3Q9H1A7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
POLR2J3Q9H1A7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
POLR2J3Q9H1A7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
POLR2J3Q9H1A7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
POLR2J3Q9H1A7 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.51■□□□□ 0.55
POLR2J3Q9H1A7 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
POLR2J3Q9H1A7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.51■□□□□ 0.55
POLR2J3Q9H1A7 ZNRF2P3-201ENST00000424200 374 ntBASIC18.51■□□□□ 0.55
POLR2J3Q9H1A7 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.51■□□□□ 0.55
POLR2J3Q9H1A7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.51■□□□□ 0.55
POLR2J3Q9H1A7 AL591742.1-201ENST00000604433 565 ntBASIC18.51■□□□□ 0.55
POLR2J3Q9H1A7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.51■□□□□ 0.55
POLR2J3Q9H1A7 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.51■□□□□ 0.55
POLR2J3Q9H1A7 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
POLR2J3Q9H1A7 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
POLR2J3Q9H1A7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
POLR2J3Q9H1A7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.51■□□□□ 0.55
POLR2J3Q9H1A7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
POLR2J3Q9H1A7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
POLR2J3Q9H1A7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
POLR2J3Q9H1A7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
POLR2J3Q9H1A7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.51■□□□□ 0.55
POLR2J3Q9H1A7 AC125437.2-201ENST00000625180 2167 ntBASIC18.51■□□□□ 0.55
POLR2J3Q9H1A7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
POLR2J3Q9H1A7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
POLR2J3Q9H1A7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
POLR2J3Q9H1A7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
POLR2J3Q9H1A7 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
POLR2J3Q9H1A7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
POLR2J3Q9H1A7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
POLR2J3Q9H1A7 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
POLR2J3Q9H1A7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
POLR2J3Q9H1A7 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
POLR2J3Q9H1A7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
POLR2J3Q9H1A7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.5■□□□□ 0.55
POLR2J3Q9H1A7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
POLR2J3Q9H1A7 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
POLR2J3Q9H1A7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.5■□□□□ 0.55
POLR2J3Q9H1A7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
POLR2J3Q9H1A7 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
POLR2J3Q9H1A7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.5■□□□□ 0.55
POLR2J3Q9H1A7 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.5■□□□□ 0.55
POLR2J3Q9H1A7 KRT18P11-201ENST00000435214 1283 ntBASIC18.5■□□□□ 0.55
POLR2J3Q9H1A7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
POLR2J3Q9H1A7 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
POLR2J3Q9H1A7 TERF1P5-201ENST00000477545 1207 ntBASIC18.5■□□□□ 0.55
POLR2J3Q9H1A7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.5■□□□□ 0.55
POLR2J3Q9H1A7 AC007322.4-201ENST00000509611 723 ntBASIC18.5■□□□□ 0.55
POLR2J3Q9H1A7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
POLR2J3Q9H1A7 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
POLR2J3Q9H1A7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
POLR2J3Q9H1A7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.5■□□□□ 0.55
POLR2J3Q9H1A7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
POLR2J3Q9H1A7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
POLR2J3Q9H1A7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
POLR2J3Q9H1A7 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
POLR2J3Q9H1A7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.5■□□□□ 0.55
POLR2J3Q9H1A7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
POLR2J3Q9H1A7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
POLR2J3Q9H1A7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
POLR2J3Q9H1A7 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
POLR2J3Q9H1A7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR2J3Q9H1A7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
POLR2J3Q9H1A7 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.49■□□□□ 0.55
POLR2J3Q9H1A7 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
POLR2J3Q9H1A7 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.49■□□□□ 0.55
POLR2J3Q9H1A7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
POLR2J3Q9H1A7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR2J3Q9H1A7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR2J3Q9H1A7 AL158211.5-201ENST00000623583 2518 ntBASIC18.49■□□□□ 0.55
POLR2J3Q9H1A7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR2J3Q9H1A7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR2J3Q9H1A7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR2J3Q9H1A7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
POLR2J3Q9H1A7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.49■□□□□ 0.55
POLR2J3Q9H1A7 AL356652.1-201ENST00000615962 565 ntBASIC18.49■□□□□ 0.55
POLR2J3Q9H1A7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
POLR2J3Q9H1A7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.49■□□□□ 0.55
POLR2J3Q9H1A7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR2J3Q9H1A7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
POLR2J3Q9H1A7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.49■□□□□ 0.55
POLR2J3Q9H1A7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
POLR2J3Q9H1A7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR2J3Q9H1A7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR2J3Q9H1A7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR2J3Q9H1A7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR2J3Q9H1A7 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR2J3Q9H1A7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR2J3Q9H1A7 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.49■□□□□ 0.55
POLR2J3Q9H1A7 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
POLR2J3Q9H1A7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.48■□□□□ 0.55
POLR2J3Q9H1A7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.48■□□□□ 0.55
POLR2J3Q9H1A7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
POLR2J3Q9H1A7 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms