Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.92■□□□□ 0.3
HDHD3Q9BSH5 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HDHD3Q9BSH5 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.92■□□□□ 0.3
HDHD3Q9BSH5 KRT18P61-201ENST00000585825 1298 ntBASIC16.92■□□□□ 0.3
HDHD3Q9BSH5 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
HDHD3Q9BSH5 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.92■□□□□ 0.3
HDHD3Q9BSH5 AL020996.1-203ENST00000536896 2307 ntBASIC16.92■□□□□ 0.3
HDHD3Q9BSH5 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC16.92■□□□□ 0.3
HDHD3Q9BSH5 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.92■□□□□ 0.3
HDHD3Q9BSH5 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.92■□□□□ 0.3
HDHD3Q9BSH5 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.92■□□□□ 0.3
HDHD3Q9BSH5 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.92■□□□□ 0.3
HDHD3Q9BSH5 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HDHD3Q9BSH5 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.92■□□□□ 0.3
HDHD3Q9BSH5 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
HDHD3Q9BSH5 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HDHD3Q9BSH5 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.91■□□□□ 0.3
HDHD3Q9BSH5 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HDHD3Q9BSH5 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.91■□□□□ 0.3
HDHD3Q9BSH5 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HDHD3Q9BSH5 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HDHD3Q9BSH5 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.91■□□□□ 0.3
HDHD3Q9BSH5 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HDHD3Q9BSH5 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HDHD3Q9BSH5 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HDHD3Q9BSH5 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HDHD3Q9BSH5 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.91■□□□□ 0.3
HDHD3Q9BSH5 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HDHD3Q9BSH5 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HDHD3Q9BSH5 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.91■□□□□ 0.3
HDHD3Q9BSH5 RAB43-208ENST00000615093 783 ntTSL 5 BASIC16.91■□□□□ 0.3
HDHD3Q9BSH5 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HDHD3Q9BSH5 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HDHD3Q9BSH5 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HDHD3Q9BSH5 TMEM179-206ENST00000616017 1645 ntBASIC16.91■□□□□ 0.3
HDHD3Q9BSH5 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HDHD3Q9BSH5 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.91■□□□□ 0.3
HDHD3Q9BSH5 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.9■□□□□ 0.3
HDHD3Q9BSH5 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDHD3Q9BSH5 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDHD3Q9BSH5 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDHD3Q9BSH5 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.9■□□□□ 0.3
HDHD3Q9BSH5 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HDHD3Q9BSH5 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HDHD3Q9BSH5 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDHD3Q9BSH5 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.9■□□□□ 0.3
HDHD3Q9BSH5 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDHD3Q9BSH5 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDHD3Q9BSH5 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HDHD3Q9BSH5 MIR638-201ENST00000385237 100 ntBASIC16.9■□□□□ 0.3
HDHD3Q9BSH5 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC16.9■□□□□ 0.3
HDHD3Q9BSH5 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.9■□□□□ 0.3
HDHD3Q9BSH5 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.9■□□□□ 0.3
HDHD3Q9BSH5 UBE2DNL-204ENST00000602536 740 ntBASIC16.9■□□□□ 0.3
HDHD3Q9BSH5 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.9■□□□□ 0.3
HDHD3Q9BSH5 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.9■□□□□ 0.3
HDHD3Q9BSH5 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDHD3Q9BSH5 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.9■□□□□ 0.3
HDHD3Q9BSH5 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HDHD3Q9BSH5 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDHD3Q9BSH5 AC018445.3-201ENST00000624177 1945 ntBASIC16.9■□□□□ 0.3
HDHD3Q9BSH5 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
HDHD3Q9BSH5 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
HDHD3Q9BSH5 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
HDHD3Q9BSH5 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.89■□□□□ 0.3
HDHD3Q9BSH5 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
HDHD3Q9BSH5 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.89■□□□□ 0.29
HDHD3Q9BSH5 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.89■□□□□ 0.29
HDHD3Q9BSH5 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDHD3Q9BSH5 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HDHD3Q9BSH5 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HDHD3Q9BSH5 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDHD3Q9BSH5 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HDHD3Q9BSH5 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.89■□□□□ 0.29
HDHD3Q9BSH5 CDV3P1-201ENST00000471403 739 ntBASIC16.89■□□□□ 0.29
HDHD3Q9BSH5 SLC7A5P1-201ENST00000568957 537 ntBASIC16.89■□□□□ 0.29
HDHD3Q9BSH5 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.89■□□□□ 0.29
HDHD3Q9BSH5 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
HDHD3Q9BSH5 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.89■□□□□ 0.29
HDHD3Q9BSH5 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDHD3Q9BSH5 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HDHD3Q9BSH5 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
HDHD3Q9BSH5 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDHD3Q9BSH5 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.88■□□□□ 0.29
HDHD3Q9BSH5 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HDHD3Q9BSH5 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
HDHD3Q9BSH5 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDHD3Q9BSH5 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
HDHD3Q9BSH5 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDHD3Q9BSH5 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.88■□□□□ 0.29
HDHD3Q9BSH5 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDHD3Q9BSH5 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDHD3Q9BSH5 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HDHD3Q9BSH5 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.88■□□□□ 0.29
HDHD3Q9BSH5 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HDHD3Q9BSH5 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HDHD3Q9BSH5 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDHD3Q9BSH5 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
HDHD3Q9BSH5 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HDHD3Q9BSH5 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms