Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
HPS1Q92902 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HPS1Q92902 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.23■□□□□ 0.51
HPS1Q92902 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.23■□□□□ 0.51
HPS1Q92902 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.23■□□□□ 0.51
HPS1Q92902 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
HPS1Q92902 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
HPS1Q92902 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.23■□□□□ 0.51
HPS1Q92902 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HPS1Q92902 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.23■□□□□ 0.51
HPS1Q92902 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HPS1Q92902 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HPS1Q92902 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
HPS1Q92902 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HPS1Q92902 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HPS1Q92902 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HPS1Q92902 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HPS1Q92902 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
HPS1Q92902 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
HPS1Q92902 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.22■□□□□ 0.51
HPS1Q92902 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HPS1Q92902 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.22■□□□□ 0.51
HPS1Q92902 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HPS1Q92902 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.22■□□□□ 0.51
HPS1Q92902 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
HPS1Q92902 SMUG1P1-201ENST00000590640 811 ntBASIC18.22■□□□□ 0.51
HPS1Q92902 TPRG1LP1-201ENST00000598702 760 ntBASIC18.22■□□□□ 0.51
HPS1Q92902 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.22■□□□□ 0.51
HPS1Q92902 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HPS1Q92902 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
HPS1Q92902 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HPS1Q92902 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HPS1Q92902 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HPS1Q92902 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
HPS1Q92902 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HPS1Q92902 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HPS1Q92902 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.22■□□□□ 0.51
HPS1Q92902 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.21■□□□□ 0.51
HPS1Q92902 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HPS1Q92902 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HPS1Q92902 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HPS1Q92902 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
HPS1Q92902 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
HPS1Q92902 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HPS1Q92902 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HPS1Q92902 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HPS1Q92902 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HPS1Q92902 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HPS1Q92902 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HPS1Q92902 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.21■□□□□ 0.51
HPS1Q92902 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.21■□□□□ 0.51
HPS1Q92902 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.21■□□□□ 0.51
HPS1Q92902 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.21■□□□□ 0.51
HPS1Q92902 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HPS1Q92902 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
HPS1Q92902 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HPS1Q92902 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.21■□□□□ 0.51
HPS1Q92902 BX005040.4-201ENST00000637145 1518 ntBASIC18.21■□□□□ 0.51
HPS1Q92902 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HPS1Q92902 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HPS1Q92902 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.21■□□□□ 0.51
HPS1Q92902 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
HPS1Q92902 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
HPS1Q92902 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
HPS1Q92902 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.21■□□□□ 0.51
HPS1Q92902 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.2■□□□□ 0.5
HPS1Q92902 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
HPS1Q92902 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
HPS1Q92902 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
HPS1Q92902 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HPS1Q92902 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HPS1Q92902 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.2■□□□□ 0.5
HPS1Q92902 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HPS1Q92902 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HPS1Q92902 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HPS1Q92902 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HPS1Q92902 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HPS1Q92902 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HPS1Q92902 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
HPS1Q92902 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.2■□□□□ 0.5
HPS1Q92902 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HPS1Q92902 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
HPS1Q92902 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HPS1Q92902 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.2■□□□□ 0.5
HPS1Q92902 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.2■□□□□ 0.5
HPS1Q92902 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.2■□□□□ 0.5
HPS1Q92902 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.2■□□□□ 0.5
HPS1Q92902 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HPS1Q92902 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.2■□□□□ 0.5
HPS1Q92902 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.2■□□□□ 0.5
HPS1Q92902 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HPS1Q92902 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HPS1Q92902 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
HPS1Q92902 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.2■□□□□ 0.5
HPS1Q92902 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
HPS1Q92902 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
HPS1Q92902 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.2■□□□□ 0.5
HPS1Q92902 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
HPS1Q92902 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
HPS1Q92902 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms