Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.39■□□□□ 0.85
CHD5Q8TDI0 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHD5Q8TDI0 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CHD5Q8TDI0 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.39■□□□□ 0.85
CHD5Q8TDI0 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.38■□□□□ 0.85
CHD5Q8TDI0 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CHD5Q8TDI0 AC099778.1-201ENST00000568593 1911 ntBASIC20.38■□□□□ 0.85
CHD5Q8TDI0 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.38■□□□□ 0.85
CHD5Q8TDI0 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHD5Q8TDI0 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.38■□□□□ 0.85
CHD5Q8TDI0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.38■□□□□ 0.85
CHD5Q8TDI0 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHD5Q8TDI0 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.38■□□□□ 0.85
CHD5Q8TDI0 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.38■□□□□ 0.85
CHD5Q8TDI0 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHD5Q8TDI0 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.38■□□□□ 0.85
CHD5Q8TDI0 AC120498.8-201ENST00000614275 531 ntBASIC20.38■□□□□ 0.85
CHD5Q8TDI0 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHD5Q8TDI0 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHD5Q8TDI0 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHD5Q8TDI0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.38■□□□□ 0.85
CHD5Q8TDI0 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHD5Q8TDI0 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHD5Q8TDI0 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHD5Q8TDI0 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHD5Q8TDI0 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHD5Q8TDI0 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHD5Q8TDI0 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.37■□□□□ 0.85
CHD5Q8TDI0 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.37■□□□□ 0.85
CHD5Q8TDI0 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.37■□□□□ 0.85
CHD5Q8TDI0 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHD5Q8TDI0 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHD5Q8TDI0 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.37■□□□□ 0.85
CHD5Q8TDI0 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHD5Q8TDI0 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHD5Q8TDI0 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHD5Q8TDI0 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHD5Q8TDI0 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
CHD5Q8TDI0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHD5Q8TDI0 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.37■□□□□ 0.85
CHD5Q8TDI0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.37■□□□□ 0.85
CHD5Q8TDI0 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHD5Q8TDI0 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.37■□□□□ 0.85
CHD5Q8TDI0 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.37■□□□□ 0.85
CHD5Q8TDI0 AC006058.3-201ENST00000606217 1069 ntBASIC20.37■□□□□ 0.85
CHD5Q8TDI0 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CHD5Q8TDI0 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHD5Q8TDI0 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHD5Q8TDI0 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHD5Q8TDI0 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHD5Q8TDI0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.36■□□□□ 0.85
CHD5Q8TDI0 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHD5Q8TDI0 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CHD5Q8TDI0 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CHD5Q8TDI0 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CHD5Q8TDI0 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.36■□□□□ 0.85
CHD5Q8TDI0 MTDHP1-201ENST00000605323 784 ntBASIC20.36■□□□□ 0.85
CHD5Q8TDI0 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.36■□□□□ 0.85
CHD5Q8TDI0 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CHD5Q8TDI0 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.36■□□□□ 0.85
CHD5Q8TDI0 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHD5Q8TDI0 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHD5Q8TDI0 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
CHD5Q8TDI0 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHD5Q8TDI0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHD5Q8TDI0 TCF3P1-201ENST00000423021 1937 ntBASIC20.36■□□□□ 0.85
CHD5Q8TDI0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHD5Q8TDI0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHD5Q8TDI0 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CHD5Q8TDI0 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHD5Q8TDI0 ESRRAP1-201ENST00000400596 1257 ntBASIC20.35■□□□□ 0.85
CHD5Q8TDI0 AL390719.1-204ENST00000412397 1219 ntBASIC20.35■□□□□ 0.85
CHD5Q8TDI0 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.35■□□□□ 0.85
CHD5Q8TDI0 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.35■□□□□ 0.85
CHD5Q8TDI0 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.35■□□□□ 0.85
CHD5Q8TDI0 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.35■□□□□ 0.85
CHD5Q8TDI0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CHD5Q8TDI0 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHD5Q8TDI0 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHD5Q8TDI0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHD5Q8TDI0 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.35■□□□□ 0.85
CHD5Q8TDI0 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHD5Q8TDI0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHD5Q8TDI0 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHD5Q8TDI0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.35■□□□□ 0.85
CHD5Q8TDI0 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.35■□□□□ 0.85
CHD5Q8TDI0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHD5Q8TDI0 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHD5Q8TDI0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHD5Q8TDI0 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.35■□□□□ 0.85
CHD5Q8TDI0 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHD5Q8TDI0 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHD5Q8TDI0 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHD5Q8TDI0 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHD5Q8TDI0 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CHD5Q8TDI0 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHD5Q8TDI0 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.34■□□□□ 0.85
CHD5Q8TDI0 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CHD5Q8TDI0 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.34■□□□□ 0.85
CHD5Q8TDI0 AL121829.2-201ENST00000620908 328 ntBASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms