Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.3■□□□□ 0.2
LINC00311Q8N616 AC091874.3-201ENST00000512672 1195 ntBASIC16.3■□□□□ 0.2
LINC00311Q8N616 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.3■□□□□ 0.2
LINC00311Q8N616 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.3■□□□□ 0.2
LINC00311Q8N616 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00311Q8N616 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.3■□□□□ 0.2
LINC00311Q8N616 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
LINC00311Q8N616 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.3■□□□□ 0.2
LINC00311Q8N616 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00311Q8N616 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
LINC00311Q8N616 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00311Q8N616 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00311Q8N616 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
LINC00311Q8N616 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00311Q8N616 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.29■□□□□ 0.2
LINC00311Q8N616 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00311Q8N616 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00311Q8N616 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.29■□□□□ 0.2
LINC00311Q8N616 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00311Q8N616 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00311Q8N616 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00311Q8N616 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00311Q8N616 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00311Q8N616 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00311Q8N616 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
LINC00311Q8N616 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00311Q8N616 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00311Q8N616 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LINC00311Q8N616 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.29■□□□□ 0.2
LINC00311Q8N616 DUSP5P2-201ENST00000426873 1033 ntBASIC16.29■□□□□ 0.2
LINC00311Q8N616 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.29■□□□□ 0.2
LINC00311Q8N616 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.29■□□□□ 0.2
LINC00311Q8N616 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.29■□□□□ 0.2
LINC00311Q8N616 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00311Q8N616 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.29■□□□□ 0.2
LINC00311Q8N616 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.29■□□□□ 0.2
LINC00311Q8N616 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00311Q8N616 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LINC00311Q8N616 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00311Q8N616 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00311Q8N616 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00311Q8N616 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.28■□□□□ 0.2
LINC00311Q8N616 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00311Q8N616 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00311Q8N616 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.28■□□□□ 0.2
LINC00311Q8N616 TMEM179-206ENST00000616017 1645 ntBASIC16.28■□□□□ 0.2
LINC00311Q8N616 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.28■□□□□ 0.2
LINC00311Q8N616 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.28■□□□□ 0.2
LINC00311Q8N616 AC073210.2-201ENST00000430369 194 ntBASIC16.28■□□□□ 0.2
LINC00311Q8N616 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.28■□□□□ 0.2
LINC00311Q8N616 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.28■□□□□ 0.2
LINC00311Q8N616 AC090192.1-201ENST00000517740 490 ntBASIC16.28■□□□□ 0.2
LINC00311Q8N616 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00311Q8N616 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.28■□□□□ 0.2
LINC00311Q8N616 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.28■□□□□ 0.2
LINC00311Q8N616 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.28■□□□□ 0.2
LINC00311Q8N616 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.28■□□□□ 0.2
LINC00311Q8N616 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.28■□□□□ 0.2
LINC00311Q8N616 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.28■□□□□ 0.2
LINC00311Q8N616 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.28■□□□□ 0.2
LINC00311Q8N616 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00311Q8N616 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00311Q8N616 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LINC00311Q8N616 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00311Q8N616 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00311Q8N616 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00311Q8N616 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LINC00311Q8N616 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.28■□□□□ 0.2
LINC00311Q8N616 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00311Q8N616 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00311Q8N616 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
LINC00311Q8N616 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.27■□□□□ 0.2
LINC00311Q8N616 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00311Q8N616 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.27■□□□□ 0.2
LINC00311Q8N616 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00311Q8N616 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00311Q8N616 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.27■□□□□ 0.2
LINC00311Q8N616 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.27■□□□□ 0.2
LINC00311Q8N616 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.27■□□□□ 0.2
LINC00311Q8N616 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.27■□□□□ 0.2
LINC00311Q8N616 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
LINC00311Q8N616 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.27■□□□□ 0.2
LINC00311Q8N616 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00311Q8N616 MYC-209ENST00000641252 345 ntBASIC16.27■□□□□ 0.2
LINC00311Q8N616 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.27■□□□□ 0.2
LINC00311Q8N616 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00311Q8N616 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LINC00311Q8N616 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
LINC00311Q8N616 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
LINC00311Q8N616 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
LINC00311Q8N616 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LINC00311Q8N616 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
LINC00311Q8N616 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
LINC00311Q8N616 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LINC00311Q8N616 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LINC00311Q8N616 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LINC00311Q8N616 AL391422.3-201ENST00000603791 2761 ntBASIC16.26■□□□□ 0.19
LINC00311Q8N616 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.26■□□□□ 0.19
LINC00311Q8N616 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00311Q8N616 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms