Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
TRAM1L1Q8N609 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAM1L1Q8N609 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAM1L1Q8N609 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.87■□□□□ 0.77
TRAM1L1Q8N609 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.87■□□□□ 0.77
TRAM1L1Q8N609 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAM1L1Q8N609 AL512408.1-201ENST00000569378 2000 ntBASIC19.86■□□□□ 0.77
TRAM1L1Q8N609 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
TRAM1L1Q8N609 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.86■□□□□ 0.77
TRAM1L1Q8N609 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.86■□□□□ 0.77
TRAM1L1Q8N609 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAM1L1Q8N609 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.86■□□□□ 0.77
TRAM1L1Q8N609 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAM1L1Q8N609 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAM1L1Q8N609 AL162377.1-201ENST00000618844 1793 ntBASIC19.86■□□□□ 0.77
TRAM1L1Q8N609 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
TRAM1L1Q8N609 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAM1L1Q8N609 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAM1L1Q8N609 POU5F1P3-201ENST00000428824 1078 ntBASIC19.86■□□□□ 0.77
TRAM1L1Q8N609 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.86■□□□□ 0.77
TRAM1L1Q8N609 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAM1L1Q8N609 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.86■□□□□ 0.77
TRAM1L1Q8N609 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAM1L1Q8N609 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAM1L1Q8N609 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAM1L1Q8N609 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAM1L1Q8N609 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAM1L1Q8N609 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAM1L1Q8N609 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAM1L1Q8N609 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.86■□□□□ 0.77
TRAM1L1Q8N609 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TRAM1L1Q8N609 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRAM1L1Q8N609 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAM1L1Q8N609 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAM1L1Q8N609 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
TRAM1L1Q8N609 LINC01006-201ENST00000333319 2292 ntBASIC19.85■□□□□ 0.77
TRAM1L1Q8N609 AC092667.1-201ENST00000434301 2586 ntBASIC19.85■□□□□ 0.77
TRAM1L1Q8N609 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TRAM1L1Q8N609 TSPY20P-201ENST00000450910 630 ntBASIC19.85■□□□□ 0.77
TRAM1L1Q8N609 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRAM1L1Q8N609 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.85■□□□□ 0.77
TRAM1L1Q8N609 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRAM1L1Q8N609 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.85■□□□□ 0.77
TRAM1L1Q8N609 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.85■□□□□ 0.77
TRAM1L1Q8N609 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRAM1L1Q8N609 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.85■□□□□ 0.77
TRAM1L1Q8N609 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
TRAM1L1Q8N609 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAM1L1Q8N609 AL157384.1-201ENST00000445995 2473 ntBASIC19.85■□□□□ 0.77
TRAM1L1Q8N609 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.85■□□□□ 0.77
TRAM1L1Q8N609 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
TRAM1L1Q8N609 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAM1L1Q8N609 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAM1L1Q8N609 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.85■□□□□ 0.77
TRAM1L1Q8N609 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAM1L1Q8N609 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRAM1L1Q8N609 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAM1L1Q8N609 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRAM1L1Q8N609 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
TRAM1L1Q8N609 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.85■□□□□ 0.77
TRAM1L1Q8N609 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.85■□□□□ 0.77
TRAM1L1Q8N609 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAM1L1Q8N609 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.85■□□□□ 0.77
TRAM1L1Q8N609 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.84■□□□□ 0.77
TRAM1L1Q8N609 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAM1L1Q8N609 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.84■□□□□ 0.77
TRAM1L1Q8N609 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.84■□□□□ 0.77
TRAM1L1Q8N609 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.84■□□□□ 0.77
TRAM1L1Q8N609 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TRAM1L1Q8N609 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAM1L1Q8N609 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRAM1L1Q8N609 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAM1L1Q8N609 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAM1L1Q8N609 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAM1L1Q8N609 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.84■□□□□ 0.77
TRAM1L1Q8N609 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAM1L1Q8N609 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.84■□□□□ 0.77
TRAM1L1Q8N609 FAM201B-201ENST00000458407 597 ntBASIC19.84■□□□□ 0.77
TRAM1L1Q8N609 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TRAM1L1Q8N609 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRAM1L1Q8N609 AC120498.8-201ENST00000614275 531 ntBASIC19.84■□□□□ 0.77
TRAM1L1Q8N609 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAM1L1Q8N609 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.84■□□□□ 0.77
TRAM1L1Q8N609 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAM1L1Q8N609 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAM1L1Q8N609 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAM1L1Q8N609 KRT16P6-202ENST00000425692 1426 ntBASIC19.84■□□□□ 0.77
TRAM1L1Q8N609 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAM1L1Q8N609 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAM1L1Q8N609 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAM1L1Q8N609 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRAM1L1Q8N609 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAM1L1Q8N609 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRAM1L1Q8N609 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRAM1L1Q8N609 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.83■□□□□ 0.77
TRAM1L1Q8N609 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.83■□□□□ 0.77
TRAM1L1Q8N609 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.83■□□□□ 0.77
TRAM1L1Q8N609 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.83■□□□□ 0.77
TRAM1L1Q8N609 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.83■□□□□ 0.77
TRAM1L1Q8N609 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms