Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
ABCA6Q8N139 PPP1R14BP5-201ENST00000440334 435 ntBASIC30■■■□□ 2.39
ABCA6Q8N139 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
ABCA6Q8N139 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC29.99■■■□□ 2.39
ABCA6Q8N139 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC29.99■■■□□ 2.39
ABCA6Q8N139 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC29.99■■■□□ 2.39
ABCA6Q8N139 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC29.99■■■□□ 2.39
ABCA6Q8N139 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC29.99■■■□□ 2.39
ABCA6Q8N139 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
ABCA6Q8N139 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
ABCA6Q8N139 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
ABCA6Q8N139 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
ABCA6Q8N139 AK4P3-201ENST00000418260 669 ntBASIC29.99■■■□□ 2.39
ABCA6Q8N139 AC117947.1-201ENST00000427448 529 ntBASIC29.99■■■□□ 2.39
ABCA6Q8N139 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC29.99■■■□□ 2.39
ABCA6Q8N139 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
ABCA6Q8N139 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
ABCA6Q8N139 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC29.98■■■□□ 2.39
ABCA6Q8N139 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC29.98■■■□□ 2.39
ABCA6Q8N139 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC29.98■■■□□ 2.39
ABCA6Q8N139 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC29.98■■■□□ 2.39
ABCA6Q8N139 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC29.98■■■□□ 2.39
ABCA6Q8N139 CASK-201ENST00000378154 2494 ntTSL 5 BASIC29.98■■■□□ 2.39
ABCA6Q8N139 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC29.98■■■□□ 2.39
ABCA6Q8N139 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC29.98■■■□□ 2.39
ABCA6Q8N139 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC29.97■■■□□ 2.39
ABCA6Q8N139 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC29.97■■■□□ 2.39
ABCA6Q8N139 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC29.97■■■□□ 2.39
ABCA6Q8N139 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC29.97■■■□□ 2.39
ABCA6Q8N139 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC29.97■■■□□ 2.39
ABCA6Q8N139 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC29.97■■■□□ 2.39
ABCA6Q8N139 AL445675.2-201ENST00000620291 557 ntBASIC29.97■■■□□ 2.39
ABCA6Q8N139 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
ABCA6Q8N139 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC29.97■■■□□ 2.39
ABCA6Q8N139 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC29.97■■■□□ 2.39
ABCA6Q8N139 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC29.97■■■□□ 2.39
ABCA6Q8N139 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC29.97■■■□□ 2.39
ABCA6Q8N139 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
ABCA6Q8N139 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC29.96■■■□□ 2.39
ABCA6Q8N139 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
ABCA6Q8N139 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC29.96■■■□□ 2.39
ABCA6Q8N139 LIN28AP1-201ENST00000429574 405 ntBASIC29.96■■■□□ 2.39
ABCA6Q8N139 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC29.96■■■□□ 2.39
ABCA6Q8N139 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC29.96■■■□□ 2.39
ABCA6Q8N139 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC29.96■■■□□ 2.39
ABCA6Q8N139 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC29.96■■■□□ 2.39
ABCA6Q8N139 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC29.96■■■□□ 2.39
ABCA6Q8N139 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC29.96■■■□□ 2.39
ABCA6Q8N139 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
ABCA6Q8N139 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
ABCA6Q8N139 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
ABCA6Q8N139 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
ABCA6Q8N139 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC29.96■■■□□ 2.39
ABCA6Q8N139 FAM8A6P-201ENST00000407496 1135 ntBASIC29.96■■■□□ 2.39
ABCA6Q8N139 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC29.96■■■□□ 2.39
ABCA6Q8N139 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC29.96■■■□□ 2.39
ABCA6Q8N139 FSCN1P1-201ENST00000568912 1481 ntBASIC29.95■■■□□ 2.39
ABCA6Q8N139 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
ABCA6Q8N139 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC29.95■■■□□ 2.38
ABCA6Q8N139 DUSP5P1-201ENST00000441325 1139 ntBASIC29.95■■■□□ 2.38
ABCA6Q8N139 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC29.95■■■□□ 2.38
ABCA6Q8N139 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC29.95■■■□□ 2.38
ABCA6Q8N139 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
ABCA6Q8N139 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC29.94■■■□□ 2.38
ABCA6Q8N139 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC29.94■■■□□ 2.38
ABCA6Q8N139 EGLN1P1-201ENST00000531623 762 ntBASIC29.94■■■□□ 2.38
ABCA6Q8N139 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC29.94■■■□□ 2.38
ABCA6Q8N139 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC29.94■■■□□ 2.38
ABCA6Q8N139 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC29.94■■■□□ 2.38
ABCA6Q8N139 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
ABCA6Q8N139 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
ABCA6Q8N139 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC29.94■■■□□ 2.38
ABCA6Q8N139 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
ABCA6Q8N139 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
ABCA6Q8N139 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
ABCA6Q8N139 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC29.93■■■□□ 2.38
ABCA6Q8N139 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC29.93■■■□□ 2.38
ABCA6Q8N139 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
ABCA6Q8N139 STAC-204ENST00000457375 1366 ntTSL 2 BASIC29.93■■■□□ 2.38
ABCA6Q8N139 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC29.93■■■□□ 2.38
ABCA6Q8N139 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
ABCA6Q8N139 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC29.93■■■□□ 2.38
ABCA6Q8N139 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC29.93■■■□□ 2.38
ABCA6Q8N139 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
ABCA6Q8N139 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC29.93■■■□□ 2.38
ABCA6Q8N139 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC29.93■■■□□ 2.38
ABCA6Q8N139 ATP5G1P1-201ENST00000448724 379 ntBASIC29.93■■■□□ 2.38
ABCA6Q8N139 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC29.93■■■□□ 2.38
ABCA6Q8N139 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC29.93■■■□□ 2.38
ABCA6Q8N139 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC29.93■■■□□ 2.38
ABCA6Q8N139 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC29.92■■■□□ 2.38
ABCA6Q8N139 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
ABCA6Q8N139 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC29.92■■■□□ 2.38
ABCA6Q8N139 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
ABCA6Q8N139 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
ABCA6Q8N139 AL031133.1-201ENST00000406807 723 ntBASIC29.92■■■□□ 2.38
ABCA6Q8N139 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
ABCA6Q8N139 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
ABCA6Q8N139 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC29.92■■■□□ 2.38
ABCA6Q8N139 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms