Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM48Q8IWZ4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM48Q8IWZ4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM48Q8IWZ4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
TRIM48Q8IWZ4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM48Q8IWZ4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM48Q8IWZ4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM48Q8IWZ4 RNF165-205ENST00000588679 2904 ntBASIC19.67■□□□□ 0.74
TRIM48Q8IWZ4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM48Q8IWZ4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM48Q8IWZ4 PRORSD1P-201ENST00000295112 541 ntBASIC19.67■□□□□ 0.74
TRIM48Q8IWZ4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIM48Q8IWZ4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIM48Q8IWZ4 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.67■□□□□ 0.74
TRIM48Q8IWZ4 AC073648.6-201ENST00000641589 218 ntBASIC19.67■□□□□ 0.74
TRIM48Q8IWZ4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM48Q8IWZ4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIM48Q8IWZ4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
TRIM48Q8IWZ4 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM48Q8IWZ4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TRIM48Q8IWZ4 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM48Q8IWZ4 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM48Q8IWZ4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TRIM48Q8IWZ4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TRIM48Q8IWZ4 AC005229.4-201ENST00000610085 2198 ntBASIC19.66■□□□□ 0.74
TRIM48Q8IWZ4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM48Q8IWZ4 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM48Q8IWZ4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.66■□□□□ 0.74
TRIM48Q8IWZ4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM48Q8IWZ4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM48Q8IWZ4 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM48Q8IWZ4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TRIM48Q8IWZ4 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.66■□□□□ 0.74
TRIM48Q8IWZ4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.66■□□□□ 0.74
TRIM48Q8IWZ4 AC005829.2-201ENST00000571422 1056 ntBASIC19.66■□□□□ 0.74
TRIM48Q8IWZ4 AC008687.6-201ENST00000596318 630 ntBASIC19.66■□□□□ 0.74
TRIM48Q8IWZ4 AC008403.3-201ENST00000598924 454 ntBASIC19.66■□□□□ 0.74
TRIM48Q8IWZ4 AC006557.6-201ENST00000623071 864 ntBASIC19.66■□□□□ 0.74
TRIM48Q8IWZ4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM48Q8IWZ4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM48Q8IWZ4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM48Q8IWZ4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM48Q8IWZ4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.66■□□□□ 0.74
TRIM48Q8IWZ4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM48Q8IWZ4 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM48Q8IWZ4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM48Q8IWZ4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM48Q8IWZ4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM48Q8IWZ4 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM48Q8IWZ4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM48Q8IWZ4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM48Q8IWZ4 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TRIM48Q8IWZ4 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.65■□□□□ 0.74
TRIM48Q8IWZ4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM48Q8IWZ4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM48Q8IWZ4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM48Q8IWZ4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
TRIM48Q8IWZ4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.65■□□□□ 0.74
TRIM48Q8IWZ4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM48Q8IWZ4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM48Q8IWZ4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM48Q8IWZ4 AC073130.3-201ENST00000624389 2278 ntBASIC19.65■□□□□ 0.74
TRIM48Q8IWZ4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM48Q8IWZ4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM48Q8IWZ4 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM48Q8IWZ4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM48Q8IWZ4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM48Q8IWZ4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.64■□□□□ 0.74
TRIM48Q8IWZ4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
TRIM48Q8IWZ4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.64■□□□□ 0.73
TRIM48Q8IWZ4 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM48Q8IWZ4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM48Q8IWZ4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM48Q8IWZ4 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.64■□□□□ 0.73
TRIM48Q8IWZ4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.64■□□□□ 0.73
TRIM48Q8IWZ4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TRIM48Q8IWZ4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TRIM48Q8IWZ4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.64■□□□□ 0.73
TRIM48Q8IWZ4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TRIM48Q8IWZ4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM48Q8IWZ4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
TRIM48Q8IWZ4 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.73
TRIM48Q8IWZ4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM48Q8IWZ4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.64■□□□□ 0.73
TRIM48Q8IWZ4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM48Q8IWZ4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM48Q8IWZ4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
TRIM48Q8IWZ4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.63■□□□□ 0.73
TRIM48Q8IWZ4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TRIM48Q8IWZ4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.63■□□□□ 0.73
TRIM48Q8IWZ4 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
TRIM48Q8IWZ4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TRIM48Q8IWZ4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM48Q8IWZ4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM48Q8IWZ4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
TRIM48Q8IWZ4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TRIM48Q8IWZ4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.63■□□□□ 0.73
TRIM48Q8IWZ4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.63■□□□□ 0.73
TRIM48Q8IWZ4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.63■□□□□ 0.73
TRIM48Q8IWZ4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms