Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST2H3AQ71DI3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HIST2H3AQ71DI3 PTBP1P-201ENST00000554374 1601 ntBASIC17.63■□□□□ 0.41
HIST2H3AQ71DI3 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST2H3AQ71DI3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST2H3AQ71DI3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.63■□□□□ 0.41
HIST2H3AQ71DI3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.63■□□□□ 0.41
HIST2H3AQ71DI3 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.63■□□□□ 0.41
HIST2H3AQ71DI3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.63■□□□□ 0.41
HIST2H3AQ71DI3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST2H3AQ71DI3 RAP2CP1-201ENST00000605103 478 ntBASIC17.63■□□□□ 0.41
HIST2H3AQ71DI3 AL137784.2-201ENST00000607332 1000 ntBASIC17.63■□□□□ 0.41
HIST2H3AQ71DI3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HIST2H3AQ71DI3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.63■□□□□ 0.41
HIST2H3AQ71DI3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.63■□□□□ 0.41
HIST2H3AQ71DI3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST2H3AQ71DI3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST2H3AQ71DI3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
HIST2H3AQ71DI3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.63■□□□□ 0.41
HIST2H3AQ71DI3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST2H3AQ71DI3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
HIST2H3AQ71DI3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HIST2H3AQ71DI3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.62■□□□□ 0.41
HIST2H3AQ71DI3 BX119927.1-201ENST00000636596 1552 ntBASIC17.62■□□□□ 0.41
HIST2H3AQ71DI3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIST2H3AQ71DI3 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIST2H3AQ71DI3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIST2H3AQ71DI3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HIST2H3AQ71DI3 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIST2H3AQ71DI3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.62■□□□□ 0.41
HIST2H3AQ71DI3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HIST2H3AQ71DI3 AL355472.2-201ENST00000422958 438 ntBASIC17.62■□□□□ 0.41
HIST2H3AQ71DI3 AC093787.1-201ENST00000450396 207 ntBASIC17.62■□□□□ 0.41
HIST2H3AQ71DI3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.62■□□□□ 0.41
HIST2H3AQ71DI3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.62■□□□□ 0.41
HIST2H3AQ71DI3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
HIST2H3AQ71DI3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
HIST2H3AQ71DI3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.62■□□□□ 0.41
HIST2H3AQ71DI3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIST2H3AQ71DI3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIST2H3AQ71DI3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIST2H3AQ71DI3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIST2H3AQ71DI3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIST2H3AQ71DI3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HIST2H3AQ71DI3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HIST2H3AQ71DI3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.62■□□□□ 0.41
HIST2H3AQ71DI3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.62■□□□□ 0.41
HIST2H3AQ71DI3 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.62■□□□□ 0.41
HIST2H3AQ71DI3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HIST2H3AQ71DI3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HIST2H3AQ71DI3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HIST2H3AQ71DI3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
HIST2H3AQ71DI3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.61■□□□□ 0.41
HIST2H3AQ71DI3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIST2H3AQ71DI3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIST2H3AQ71DI3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIST2H3AQ71DI3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIST2H3AQ71DI3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.61■□□□□ 0.41
HIST2H3AQ71DI3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIST2H3AQ71DI3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.61■□□□□ 0.41
HIST2H3AQ71DI3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIST2H3AQ71DI3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIST2H3AQ71DI3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
HIST2H3AQ71DI3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HIST2H3AQ71DI3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
HIST2H3AQ71DI3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HIST2H3AQ71DI3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HIST2H3AQ71DI3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
HIST2H3AQ71DI3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HIST2H3AQ71DI3 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HIST2H3AQ71DI3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HIST2H3AQ71DI3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.6■□□□□ 0.41
HIST2H3AQ71DI3 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.6■□□□□ 0.41
HIST2H3AQ71DI3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HIST2H3AQ71DI3 AL050303.2-201ENST00000619798 666 ntBASIC17.6■□□□□ 0.41
HIST2H3AQ71DI3 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.6■□□□□ 0.41
HIST2H3AQ71DI3 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.6■□□□□ 0.41
HIST2H3AQ71DI3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
HIST2H3AQ71DI3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HIST2H3AQ71DI3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HIST2H3AQ71DI3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
HIST2H3AQ71DI3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HIST2H3AQ71DI3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HIST2H3AQ71DI3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HIST2H3AQ71DI3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
HIST2H3AQ71DI3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HIST2H3AQ71DI3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HIST2H3AQ71DI3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HIST2H3AQ71DI3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
HIST2H3AQ71DI3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.59■□□□□ 0.41
HIST2H3AQ71DI3 AC026185.1-201ENST00000445748 174 ntBASIC17.59■□□□□ 0.41
HIST2H3AQ71DI3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.59■□□□□ 0.41
HIST2H3AQ71DI3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HIST2H3AQ71DI3 AL589743.5-201ENST00000616611 1050 ntBASIC17.59■□□□□ 0.41
HIST2H3AQ71DI3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HIST2H3AQ71DI3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
HIST2H3AQ71DI3 AC007952.6-201ENST00000573168 2673 ntBASIC17.59■□□□□ 0.41
HIST2H3AQ71DI3 AC003957.1-201ENST00000625108 2673 ntBASIC17.59■□□□□ 0.41
HIST2H3AQ71DI3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HIST2H3AQ71DI3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms