Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.31■□□□□ 0.36
COLCA1Q6ZS62 AC090192.1-201ENST00000517740 490 ntBASIC17.31■□□□□ 0.36
COLCA1Q6ZS62 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.31■□□□□ 0.36
COLCA1Q6ZS62 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.31■□□□□ 0.36
COLCA1Q6ZS62 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.31■□□□□ 0.36
COLCA1Q6ZS62 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.31■□□□□ 0.36
COLCA1Q6ZS62 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.31■□□□□ 0.36
COLCA1Q6ZS62 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.31■□□□□ 0.36
COLCA1Q6ZS62 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COLCA1Q6ZS62 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.31■□□□□ 0.36
COLCA1Q6ZS62 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.31■□□□□ 0.36
COLCA1Q6ZS62 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COLCA1Q6ZS62 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
COLCA1Q6ZS62 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.31■□□□□ 0.36
COLCA1Q6ZS62 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COLCA1Q6ZS62 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
COLCA1Q6ZS62 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COLCA1Q6ZS62 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.3■□□□□ 0.36
COLCA1Q6ZS62 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COLCA1Q6ZS62 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COLCA1Q6ZS62 HLA-G-202ENST00000376815 851 ntBASIC17.3■□□□□ 0.36
COLCA1Q6ZS62 HLA-G-203ENST00000376818 1127 ntBASIC17.3■□□□□ 0.36
COLCA1Q6ZS62 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
COLCA1Q6ZS62 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.3■□□□□ 0.36
COLCA1Q6ZS62 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.3■□□□□ 0.36
COLCA1Q6ZS62 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COLCA1Q6ZS62 AC091874.3-201ENST00000512672 1195 ntBASIC17.3■□□□□ 0.36
COLCA1Q6ZS62 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COLCA1Q6ZS62 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COLCA1Q6ZS62 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.3■□□□□ 0.36
COLCA1Q6ZS62 MIR4758-201ENST00000577688 71 ntBASIC17.3■□□□□ 0.36
COLCA1Q6ZS62 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.3■□□□□ 0.36
COLCA1Q6ZS62 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
COLCA1Q6ZS62 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.3■□□□□ 0.36
COLCA1Q6ZS62 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COLCA1Q6ZS62 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COLCA1Q6ZS62 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COLCA1Q6ZS62 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COLCA1Q6ZS62 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
COLCA1Q6ZS62 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COLCA1Q6ZS62 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
COLCA1Q6ZS62 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
COLCA1Q6ZS62 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
COLCA1Q6ZS62 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COLCA1Q6ZS62 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.29■□□□□ 0.36
COLCA1Q6ZS62 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.29■□□□□ 0.36
COLCA1Q6ZS62 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COLCA1Q6ZS62 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.29■□□□□ 0.36
COLCA1Q6ZS62 DUSP5P2-201ENST00000426873 1033 ntBASIC17.29■□□□□ 0.36
COLCA1Q6ZS62 AC073210.2-201ENST00000430369 194 ntBASIC17.29■□□□□ 0.36
COLCA1Q6ZS62 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.29■□□□□ 0.36
COLCA1Q6ZS62 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.29■□□□□ 0.36
COLCA1Q6ZS62 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.29■□□□□ 0.36
COLCA1Q6ZS62 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.29■□□□□ 0.36
COLCA1Q6ZS62 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COLCA1Q6ZS62 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.29■□□□□ 0.36
COLCA1Q6ZS62 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.29■□□□□ 0.36
COLCA1Q6ZS62 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COLCA1Q6ZS62 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
COLCA1Q6ZS62 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.29■□□□□ 0.36
COLCA1Q6ZS62 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COLCA1Q6ZS62 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COLCA1Q6ZS62 KRT16P6-202ENST00000425692 1426 ntBASIC17.29■□□□□ 0.36
COLCA1Q6ZS62 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.29■□□□□ 0.36
COLCA1Q6ZS62 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COLCA1Q6ZS62 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
COLCA1Q6ZS62 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
COLCA1Q6ZS62 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.28■□□□□ 0.36
COLCA1Q6ZS62 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.28■□□□□ 0.36
COLCA1Q6ZS62 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COLCA1Q6ZS62 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
COLCA1Q6ZS62 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
COLCA1Q6ZS62 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
COLCA1Q6ZS62 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.28■□□□□ 0.36
COLCA1Q6ZS62 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.28■□□□□ 0.36
COLCA1Q6ZS62 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.28■□□□□ 0.36
COLCA1Q6ZS62 MYC-209ENST00000641252 345 ntBASIC17.28■□□□□ 0.36
COLCA1Q6ZS62 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
COLCA1Q6ZS62 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
COLCA1Q6ZS62 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COLCA1Q6ZS62 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COLCA1Q6ZS62 SLC25A24-204ENST00000569674 2357 ntBASIC17.28■□□□□ 0.36
COLCA1Q6ZS62 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
COLCA1Q6ZS62 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
COLCA1Q6ZS62 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COLCA1Q6ZS62 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COLCA1Q6ZS62 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COLCA1Q6ZS62 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COLCA1Q6ZS62 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COLCA1Q6ZS62 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
COLCA1Q6ZS62 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COLCA1Q6ZS62 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.27■□□□□ 0.36
COLCA1Q6ZS62 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COLCA1Q6ZS62 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.27■□□□□ 0.36
COLCA1Q6ZS62 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.27■□□□□ 0.36
COLCA1Q6ZS62 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COLCA1Q6ZS62 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.27■□□□□ 0.36
COLCA1Q6ZS62 AC142086.2-201ENST00000569753 217 ntBASIC17.27■□□□□ 0.36
COLCA1Q6ZS62 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.27■□□□□ 0.36
COLCA1Q6ZS62 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms