Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
ZNF549Q6P9A3 AL691432.2-201ENST00000607222 2038 ntBASIC19.94■□□□□ 0.78
ZNF549Q6P9A3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF549Q6P9A3 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF549Q6P9A3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF549Q6P9A3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.94■□□□□ 0.78
ZNF549Q6P9A3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
ZNF549Q6P9A3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.94■□□□□ 0.78
ZNF549Q6P9A3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
ZNF549Q6P9A3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF549Q6P9A3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF549Q6P9A3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF549Q6P9A3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.94■□□□□ 0.78
ZNF549Q6P9A3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF549Q6P9A3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF549Q6P9A3 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF549Q6P9A3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF549Q6P9A3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF549Q6P9A3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF549Q6P9A3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
ZNF549Q6P9A3 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF549Q6P9A3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.93■□□□□ 0.78
ZNF549Q6P9A3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF549Q6P9A3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.93■□□□□ 0.78
ZNF549Q6P9A3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.93■□□□□ 0.78
ZNF549Q6P9A3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.93■□□□□ 0.78
ZNF549Q6P9A3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.93■□□□□ 0.78
ZNF549Q6P9A3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.93■□□□□ 0.78
ZNF549Q6P9A3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.93■□□□□ 0.78
ZNF549Q6P9A3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF549Q6P9A3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF549Q6P9A3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
ZNF549Q6P9A3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
ZNF549Q6P9A3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF549Q6P9A3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.93■□□□□ 0.78
ZNF549Q6P9A3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF549Q6P9A3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF549Q6P9A3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.93■□□□□ 0.78
ZNF549Q6P9A3 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF549Q6P9A3 KRT17P1-201ENST00000399211 1546 ntBASIC19.92■□□□□ 0.78
ZNF549Q6P9A3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.92■□□□□ 0.78
ZNF549Q6P9A3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.92■□□□□ 0.78
ZNF549Q6P9A3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF549Q6P9A3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF549Q6P9A3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF549Q6P9A3 AL512625.2-201ENST00000417533 625 ntBASIC19.92■□□□□ 0.78
ZNF549Q6P9A3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.92■□□□□ 0.78
ZNF549Q6P9A3 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.92■□□□□ 0.78
ZNF549Q6P9A3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF549Q6P9A3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF549Q6P9A3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF549Q6P9A3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF549Q6P9A3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF549Q6P9A3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF549Q6P9A3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF549Q6P9A3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF549Q6P9A3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF549Q6P9A3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF549Q6P9A3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
ZNF549Q6P9A3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.91■□□□□ 0.78
ZNF549Q6P9A3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF549Q6P9A3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.91■□□□□ 0.78
ZNF549Q6P9A3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
ZNF549Q6P9A3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF549Q6P9A3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.91■□□□□ 0.78
ZNF549Q6P9A3 AC133552.2-202ENST00000575694 574 ntBASIC19.91■□□□□ 0.78
ZNF549Q6P9A3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF549Q6P9A3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF549Q6P9A3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF549Q6P9A3 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.91■□□□□ 0.78
ZNF549Q6P9A3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF549Q6P9A3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF549Q6P9A3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF549Q6P9A3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF549Q6P9A3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF549Q6P9A3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF549Q6P9A3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.9■□□□□ 0.78
ZNF549Q6P9A3 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.9■□□□□ 0.78
ZNF549Q6P9A3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF549Q6P9A3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF549Q6P9A3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.9■□□□□ 0.78
ZNF549Q6P9A3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
ZNF549Q6P9A3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF549Q6P9A3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.9■□□□□ 0.78
ZNF549Q6P9A3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.9■□□□□ 0.78
ZNF549Q6P9A3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.9■□□□□ 0.78
ZNF549Q6P9A3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.9■□□□□ 0.78
ZNF549Q6P9A3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.9■□□□□ 0.78
ZNF549Q6P9A3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF549Q6P9A3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF549Q6P9A3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
ZNF549Q6P9A3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF549Q6P9A3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF549Q6P9A3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
ZNF549Q6P9A3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF549Q6P9A3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF549Q6P9A3 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.89■□□□□ 0.77
ZNF549Q6P9A3 CROCCP5-201ENST00000436658 830 ntBASIC19.89■□□□□ 0.77
ZNF549Q6P9A3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF549Q6P9A3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms