Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRTCAP3Q53RY4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRTCAP3Q53RY4 AL117328.2-201ENST00000624617 1940 ntBASIC18.03■□□□□ 0.48
KRTCAP3Q53RY4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.03■□□□□ 0.48
KRTCAP3Q53RY4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRTCAP3Q53RY4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRTCAP3Q53RY4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRTCAP3Q53RY4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
KRTCAP3Q53RY4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KRTCAP3Q53RY4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KRTCAP3Q53RY4 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KRTCAP3Q53RY4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
KRTCAP3Q53RY4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.02■□□□□ 0.48
KRTCAP3Q53RY4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
KRTCAP3Q53RY4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KRTCAP3Q53RY4 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
KRTCAP3Q53RY4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.02■□□□□ 0.48
KRTCAP3Q53RY4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.02■□□□□ 0.48
KRTCAP3Q53RY4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.02■□□□□ 0.48
KRTCAP3Q53RY4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.02■□□□□ 0.48
KRTCAP3Q53RY4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
KRTCAP3Q53RY4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
KRTCAP3Q53RY4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.01■□□□□ 0.47
KRTCAP3Q53RY4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRTCAP3Q53RY4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
KRTCAP3Q53RY4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRTCAP3Q53RY4 KRT8P20-201ENST00000423953 1409 ntBASIC18.01■□□□□ 0.47
KRTCAP3Q53RY4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
KRTCAP3Q53RY4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRTCAP3Q53RY4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.01■□□□□ 0.47
KRTCAP3Q53RY4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.01■□□□□ 0.47
KRTCAP3Q53RY4 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRTCAP3Q53RY4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRTCAP3Q53RY4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
KRTCAP3Q53RY4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
KRTCAP3Q53RY4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.01■□□□□ 0.47
KRTCAP3Q53RY4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.01■□□□□ 0.47
KRTCAP3Q53RY4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.01■□□□□ 0.47
KRTCAP3Q53RY4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.01■□□□□ 0.47
KRTCAP3Q53RY4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRTCAP3Q53RY4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRTCAP3Q53RY4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.01■□□□□ 0.47
KRTCAP3Q53RY4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRTCAP3Q53RY4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
KRTCAP3Q53RY4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
KRTCAP3Q53RY4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18■□□□□ 0.47
KRTCAP3Q53RY4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18■□□□□ 0.47
KRTCAP3Q53RY4 AC124283.5-201ENST00000624661 1809 ntBASIC18■□□□□ 0.47
KRTCAP3Q53RY4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KRTCAP3Q53RY4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
KRTCAP3Q53RY4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18■□□□□ 0.47
KRTCAP3Q53RY4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KRTCAP3Q53RY4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
KRTCAP3Q53RY4 TSPY15P-201ENST00000457163 923 ntBASIC18■□□□□ 0.47
KRTCAP3Q53RY4 AP002982.1-201ENST00000492365 877 ntBASIC18■□□□□ 0.47
KRTCAP3Q53RY4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18■□□□□ 0.47
KRTCAP3Q53RY4 AL353708.3-201ENST00000610272 989 ntBASIC18■□□□□ 0.47
KRTCAP3Q53RY4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18■□□□□ 0.47
KRTCAP3Q53RY4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KRTCAP3Q53RY4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
KRTCAP3Q53RY4 BID-212ENST00000614949 1988 ntTSL 5 BASIC18■□□□□ 0.47
KRTCAP3Q53RY4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
KRTCAP3Q53RY4 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18■□□□□ 0.47
KRTCAP3Q53RY4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
KRTCAP3Q53RY4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18■□□□□ 0.47
KRTCAP3Q53RY4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
KRTCAP3Q53RY4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.99■□□□□ 0.47
KRTCAP3Q53RY4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
KRTCAP3Q53RY4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
KRTCAP3Q53RY4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
KRTCAP3Q53RY4 MMP23A-201ENST00000234610 1017 ntBASIC17.99■□□□□ 0.47
KRTCAP3Q53RY4 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.99■□□□□ 0.47
KRTCAP3Q53RY4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
KRTCAP3Q53RY4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
KRTCAP3Q53RY4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
KRTCAP3Q53RY4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.99■□□□□ 0.47
KRTCAP3Q53RY4 KRT18P21-201ENST00000515767 1272 ntBASIC17.99■□□□□ 0.47
KRTCAP3Q53RY4 AL031963.3-201ENST00000606441 850 ntBASIC17.99■□□□□ 0.47
KRTCAP3Q53RY4 AC012306.2-201ENST00000609350 630 ntBASIC17.99■□□□□ 0.47
KRTCAP3Q53RY4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.99■□□□□ 0.47
KRTCAP3Q53RY4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
KRTCAP3Q53RY4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
KRTCAP3Q53RY4 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
KRTCAP3Q53RY4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
KRTCAP3Q53RY4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.98■□□□□ 0.47
KRTCAP3Q53RY4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.98■□□□□ 0.47
KRTCAP3Q53RY4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.98■□□□□ 0.47
KRTCAP3Q53RY4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
KRTCAP3Q53RY4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
KRTCAP3Q53RY4 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KRTCAP3Q53RY4 FBXW4P1-201ENST00000426721 2239 ntBASIC17.98■□□□□ 0.47
KRTCAP3Q53RY4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KRTCAP3Q53RY4 FAM197Y1-201ENST00000421178 764 ntBASIC17.98■□□□□ 0.47
KRTCAP3Q53RY4 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
KRTCAP3Q53RY4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.98■□□□□ 0.47
KRTCAP3Q53RY4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
KRTCAP3Q53RY4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KRTCAP3Q53RY4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.98■□□□□ 0.47
KRTCAP3Q53RY4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KRTCAP3Q53RY4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms