Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
PCDH1Q08174 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.37■□□□□ 0.69
PCDH1Q08174 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH1Q08174 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PCDH1Q08174 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH1Q08174 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH1Q08174 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDH1Q08174 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH1Q08174 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH1Q08174 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH1Q08174 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH1Q08174 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
PCDH1Q08174 KRT8P17-201ENST00000453110 1448 ntBASIC19.36■□□□□ 0.69
PCDH1Q08174 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH1Q08174 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH1Q08174 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH1Q08174 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH1Q08174 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.36■□□□□ 0.69
PCDH1Q08174 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH1Q08174 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH1Q08174 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.36■□□□□ 0.69
PCDH1Q08174 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH1Q08174 CROCCP5-201ENST00000436658 830 ntBASIC19.36■□□□□ 0.69
PCDH1Q08174 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH1Q08174 AF201337.1-201ENST00000520239 748 ntBASIC19.36■□□□□ 0.69
PCDH1Q08174 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDH1Q08174 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.36■□□□□ 0.69
PCDH1Q08174 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.36■□□□□ 0.69
PCDH1Q08174 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
PCDH1Q08174 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH1Q08174 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH1Q08174 KRT17P1-201ENST00000399211 1546 ntBASIC19.35■□□□□ 0.69
PCDH1Q08174 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PCDH1Q08174 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH1Q08174 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PCDH1Q08174 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH1Q08174 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PCDH1Q08174 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH1Q08174 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH1Q08174 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.35■□□□□ 0.69
PCDH1Q08174 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.35■□□□□ 0.69
PCDH1Q08174 AC023632.3-201ENST00000521633 145 ntBASIC19.35■□□□□ 0.69
PCDH1Q08174 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.35■□□□□ 0.69
PCDH1Q08174 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH1Q08174 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH1Q08174 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH1Q08174 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.35■□□□□ 0.69
PCDH1Q08174 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH1Q08174 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH1Q08174 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH1Q08174 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH1Q08174 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH1Q08174 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH1Q08174 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
PCDH1Q08174 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH1Q08174 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
PCDH1Q08174 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH1Q08174 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH1Q08174 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
PCDH1Q08174 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH1Q08174 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH1Q08174 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH1Q08174 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH1Q08174 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH1Q08174 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH1Q08174 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH1Q08174 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDH1Q08174 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDH1Q08174 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDH1Q08174 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH1Q08174 AL031963.3-201ENST00000606441 850 ntBASIC19.34■□□□□ 0.69
PCDH1Q08174 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH1Q08174 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH1Q08174 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDH1Q08174 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PCDH1Q08174 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH1Q08174 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH1Q08174 RNF165-205ENST00000588679 2904 ntBASIC19.34■□□□□ 0.69
PCDH1Q08174 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH1Q08174 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.33■□□□□ 0.69
PCDH1Q08174 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.33■□□□□ 0.69
PCDH1Q08174 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.69
PCDH1Q08174 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.33■□□□□ 0.69
PCDH1Q08174 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDH1Q08174 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PCDH1Q08174 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PCDH1Q08174 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PCDH1Q08174 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.33■□□□□ 0.68
PCDH1Q08174 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.33■□□□□ 0.68
PCDH1Q08174 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDH1Q08174 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.33■□□□□ 0.68
PCDH1Q08174 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.33■□□□□ 0.68
PCDH1Q08174 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
PCDH1Q08174 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDH1Q08174 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDH1Q08174 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDH1Q08174 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDH1Q08174 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PCDH1Q08174 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDH1Q08174 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms