Protein–RNA interactions for Protein: P89105

CTR9, RNA polymerase-associated protein CTR9, yeastyeast

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTR9P89105 SAP190YKR028W 3102 nt2.54□□□□□ -2
CTR9P89105 SPP41YDR464W 4308 nt2.53□□□□□ -2
CTR9P89105 STH1YIL126W 4080 nt2.53□□□□□ -2
CTR9P89105 YKL165C-AYKL165C-A 234 nt2.53□□□□□ -2
CTR9P89105 SKP2YNL311C 2292 nt2.53□□□□□ -2
CTR9P89105 ENV11YGR071C 2583 nt2.53□□□□□ -2.01
CTR9P89105 PDR3YBL005W 2931 nt2.52□□□□□ -2.01
CTR9P89105 IRE1YHR079C 3348 nt2.52□□□□□ -2.01
CTR9P89105 YDR341CYDR341C 1824 nt2.52□□□□□ -2.01
CTR9P89105 TUS1YLR425W 3924 nt2.52□□□□□ -2.01
CTR9P89105 YMR326CYMR326C 309 nt2.52□□□□□ -2.01
CTR9P89105 tC(GCA)BtC(GCA)B 72 nt2.51□□□□□ -2.01
CTR9P89105 tC(GCA)GtC(GCA)G 72 nt2.51□□□□□ -2.01
CTR9P89105 tC(GCA)P1tC(GCA)P1 72 nt2.51□□□□□ -2.01
CTR9P89105 tC(GCA)P2tC(GCA)P2 72 nt2.51□□□□□ -2.01
CTR9P89105 YPL044CYPL044C 549 nt2.51□□□□□ -2.01
CTR9P89105 SEC16YPL085W 6588 nt2.51□□□□□ -2.01
CTR9P89105 PDR11YIL013C 4236 nt2.5□□□□□ -2.01
CTR9P89105 YDR544CYDR544C 429 nt2.5□□□□□ -2.01
CTR9P89105 CTR9YOL145C 3234 nt2.5□□□□□ -2.01
CTR9P89105 UBR1YGR184C 5853 nt2.5□□□□□ -2.01
CTR9P89105 TFB5YDR079C-A 219 nt2.49□□□□□ -2.01
CTR9P89105 CTF4YPR135W 2784 nt2.49□□□□□ -2.01
CTR9P89105 AGC1YPR021C 2709 nt2.48□□□□□ -2.01
CTR9P89105 FRK1YPL141C 2598 nt2.48□□□□□ -2.01
CTR9P89105 YHR180W-AYHR180W-A 183 nt2.48□□□□□ -2.01
CTR9P89105 ALK1YGL021W 2283 nt2.48□□□□□ -2.01
CTR9P89105 APL5YPL195W 2799 nt2.47□□□□□ -2.01
CTR9P89105 PKH2YOL100W 3246 nt2.47□□□□□ -2.01
CTR9P89105 MSH5YDL154W 2706 nt2.47□□□□□ -2.01
CTR9P89105 SYH1YPL105C 2550 nt2.46□□□□□ -2.02
CTR9P89105 TIM9YEL020W-A 264 nt2.46□□□□□ -2.02
CTR9P89105 YER053C-AYER053C-A 114 nt2.46□□□□□ -2.02
CTR9P89105 YJL052C-AYJL052C-A 120 nt2.46□□□□□ -2.02
CTR9P89105 RPS17AYML024W 411 nt2.46□□□□□ -2.02
CTR9P89105 RPS30BYOR182C 192 nt2.46□□□□□ -2.02
CTR9P89105 GIP3YPL137C 3831 nt2.46□□□□□ -2.02
CTR9P89105 BNI1YNL271C 5862 nt2.45□□□□□ -2.02
CTR9P89105 SEC31YDL195W 3822 nt2.45□□□□□ -2.02
CTR9P89105 YCR038W-AYCR038W-A 126 nt2.44□□□□□ -2.02
CTR9P89105 YDR521WYDR521W 336 nt2.44□□□□□ -2.02
CTR9P89105 YIL071W-AYIL071W-A 477 nt2.44□□□□□ -2.02
CTR9P89105 YBR099CYBR099C 384 nt2.44□□□□□ -2.02
CTR9P89105 YDR354C-AYDR354C-A 144 nt2.43□□□□□ -2.02
CTR9P89105 SLI15YBR156C 2097 nt2.42□□□□□ -2.02
CTR9P89105 PMP2YEL017C-A 132 nt2.42□□□□□ -2.02
CTR9P89105 YKR075W-AYKR075W-A 270 nt2.42□□□□□ -2.02
CTR9P89105 RGA1YOR127W 3024 nt2.42□□□□□ -2.02
CTR9P89105 RAV1YJR033C 4074 nt2.41□□□□□ -2.02
CTR9P89105 PRP5YBR237W 2550 nt2.41□□□□□ -2.02
CTR9P89105 RPL37BYDR500C 267 nt2.41□□□□□ -2.02
CTR9P89105 YIL134C-AYIL134C-A 204 nt2.41□□□□□ -2.02
CTR9P89105 YPR097WYPR097W 3222 nt2.41□□□□□ -2.02
CTR9P89105 YOR019WYOR019W 2193 nt2.4□□□□□ -2.02
CTR9P89105 PAA1YDR071C 576 nt2.4□□□□□ -2.03
CTR9P89105 CHC1YGL206C 4962 nt2.4□□□□□ -2.03
CTR9P89105 UBP1YDL122W 2430 nt2.4□□□□□ -2.03
CTR9P89105 IFH1YLR223C 3258 nt2.39□□□□□ -2.03
CTR9P89105 APL1YJR005W 2103 nt2.39□□□□□ -2.03
CTR9P89105 SCP160YJL080C 3669 nt2.39□□□□□ -2.03
CTR9P89105 RTT101YJL047C 2529 nt2.39□□□□□ -2.03
CTR9P89105 COG4YPR105C 2586 nt2.39□□□□□ -2.03
CTR9P89105 YCR095W-AYCR095W-A 159 nt2.39□□□□□ -2.03
CTR9P89105 COX12YLR038C 252 nt2.39□□□□□ -2.03
CTR9P89105 CMC4YMR194C-B 222 nt2.39□□□□□ -2.03
CTR9P89105 USO1YDL058W 5373 nt2.39□□□□□ -2.03
CTR9P89105 YOR343W-BYOR343W-B 5313 nt2.38□□□□□ -2.03
CTR9P89105 YDL247W-AYDL247W-A 75 nt2.38□□□□□ -2.03
CTR9P89105 YHR217CYHR217C 462 nt2.38□□□□□ -2.03
CTR9P89105 YMR175W-AYMR175W-A 195 nt2.38□□□□□ -2.03
CTR9P89105 TTI1YKL033W 3117 nt2.38□□□□□ -2.03
CTR9P89105 NEO1YIL048W 3456 nt2.37□□□□□ -2.03
CTR9P89105 YDL118WYDL118W 381 nt2.37□□□□□ -2.03
CTR9P89105 YFR012W-AYFR012W-A 87 nt2.37□□□□□ -2.03
CTR9P89105 YBR206WYBR206W 324 nt2.37□□□□□ -2.03
CTR9P89105 RTT107YHR154W 3213 nt2.36□□□□□ -2.03
CTR9P89105 YCR087C-AYCR087C-A 462 nt2.36□□□□□ -2.03
CTR9P89105 YJL026C-AYJL026C-A 222 nt2.36□□□□□ -2.03
CTR9P89105 BRE1YDL074C 2103 nt2.36□□□□□ -2.03
CTR9P89105 YNL144CYNL144C 2223 nt2.36□□□□□ -2.03
CTR9P89105 UTP22YGR090W 3714 nt2.35□□□□□ -2.03
CTR9P89105 YIL002W-AYIL002W-A 210 nt2.35□□□□□ -2.03
CTR9P89105 ADR1YDR216W 3972 nt2.35□□□□□ -2.03
CTR9P89105 ATG11YPR049C 3537 nt2.34□□□□□ -2.03
CTR9P89105 tL(UAA)QtL(UAA)Q 85 nt2.34□□□□□ -2.03
CTR9P89105 YNL103W-AYNL103W-A 90 nt2.34□□□□□ -2.03
CTR9P89105 SEY1YOR165W 2331 nt2.33□□□□□ -2.04
CTR9P89105 YNL211CYNL211C 261 nt2.33□□□□□ -2.04
CTR9P89105 HER1YOR227W 3741 nt2.32□□□□□ -2.04
CTR9P89105 UTP8YGR128C 2142 nt2.32□□□□□ -2.04
CTR9P89105 CHS6YJL099W 2241 nt2.32□□□□□ -2.04
CTR9P89105 snR70snR70 164 nt2.32□□□□□ -2.04
CTR9P89105 CDC31YOR257W 486 nt2.32□□□□□ -2.04
CTR9P89105 GCN2YDR283C 4980 nt2.31□□□□□ -2.04
CTR9P89105 snR61snR61 90 nt2.31□□□□□ -2.04
CTR9P89105 OST4YDL232W 111 nt2.31□□□□□ -2.04
CTR9P89105 YLR282CYLR282C 342 nt2.31□□□□□ -2.04
CTR9P89105 NUP170YBL079W 4509 nt2.3□□□□□ -2.04
CTR9P89105 TOR2YKL203C 7425 nt2.3□□□□□ -2.04
CTR9P89105 KOG1YHR186C 4674 nt2.3□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 15.8 ms