Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPS4XP62701 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
RPS4XP62701 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPS4XP62701 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.13■□□□□ 0.49
RPS4XP62701 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.13■□□□□ 0.49
RPS4XP62701 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RPS4XP62701 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.13■□□□□ 0.49
RPS4XP62701 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RPS4XP62701 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPS4XP62701 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPS4XP62701 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RPS4XP62701 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RPS4XP62701 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.13■□□□□ 0.49
RPS4XP62701 AC069152.1-201ENST00000438030 544 ntBASIC18.13■□□□□ 0.49
RPS4XP62701 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RPS4XP62701 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RPS4XP62701 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.13■□□□□ 0.49
RPS4XP62701 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.13■□□□□ 0.49
RPS4XP62701 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPS4XP62701 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RPS4XP62701 AC068338.2-201ENST00000563278 1430 ntBASIC18.13■□□□□ 0.49
RPS4XP62701 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.13■□□□□ 0.49
RPS4XP62701 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.13■□□□□ 0.49
RPS4XP62701 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPS4XP62701 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RPS4XP62701 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPS4XP62701 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPS4XP62701 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.12■□□□□ 0.49
RPS4XP62701 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RPS4XP62701 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPS4XP62701 AL691432.2-201ENST00000607222 2038 ntBASIC18.12■□□□□ 0.49
RPS4XP62701 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.12■□□□□ 0.49
RPS4XP62701 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPS4XP62701 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.12■□□□□ 0.49
RPS4XP62701 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.12■□□□□ 0.49
RPS4XP62701 TSPY20P-201ENST00000450910 630 ntBASIC18.12■□□□□ 0.49
RPS4XP62701 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.12■□□□□ 0.49
RPS4XP62701 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPS4XP62701 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.12■□□□□ 0.49
RPS4XP62701 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPS4XP62701 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RPS4XP62701 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.12■□□□□ 0.49
RPS4XP62701 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RPS4XP62701 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.11■□□□□ 0.49
RPS4XP62701 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPS4XP62701 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RPS4XP62701 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPS4XP62701 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
RPS4XP62701 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RPS4XP62701 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
RPS4XP62701 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPS4XP62701 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
RPS4XP62701 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPS4XP62701 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPS4XP62701 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPS4XP62701 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
RPS4XP62701 MCRIP2P1-201ENST00000394346 511 ntBASIC18.11■□□□□ 0.49
RPS4XP62701 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.11■□□□□ 0.49
RPS4XP62701 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RPS4XP62701 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
RPS4XP62701 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.11■□□□□ 0.49
RPS4XP62701 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPS4XP62701 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPS4XP62701 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
RPS4XP62701 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPS4XP62701 PTBP1P-201ENST00000554374 1601 ntBASIC18.11■□□□□ 0.49
RPS4XP62701 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.11■□□□□ 0.49
RPS4XP62701 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
RPS4XP62701 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPS4XP62701 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.11■□□□□ 0.49
RPS4XP62701 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPS4XP62701 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.11■□□□□ 0.49
RPS4XP62701 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.11■□□□□ 0.49
RPS4XP62701 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPS4XP62701 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPS4XP62701 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPS4XP62701 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPS4XP62701 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
RPS4XP62701 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RPS4XP62701 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPS4XP62701 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.1■□□□□ 0.49
RPS4XP62701 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RPS4XP62701 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPS4XP62701 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RPS4XP62701 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.1■□□□□ 0.49
RPS4XP62701 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPS4XP62701 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RPS4XP62701 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPS4XP62701 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPS4XP62701 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.1■□□□□ 0.49
RPS4XP62701 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
RPS4XP62701 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RPS4XP62701 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RPS4XP62701 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPS4XP62701 AC125437.2-201ENST00000625180 2167 ntBASIC18.1■□□□□ 0.49
RPS4XP62701 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
RPS4XP62701 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RPS4XP62701 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.09■□□□□ 0.49
RPS4XP62701 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPS4XP62701 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms