Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPS3AP61247 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPS3AP61247 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RPS3AP61247 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPS3AP61247 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
RPS3AP61247 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RPS3AP61247 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RPS3AP61247 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RPS3AP61247 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.74■□□□□ 0.59
RPS3AP61247 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPS3AP61247 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
RPS3AP61247 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RPS3AP61247 MIR663A-201ENST00000385250 93 ntBASIC18.74■□□□□ 0.59
RPS3AP61247 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.74■□□□□ 0.59
RPS3AP61247 AC007322.4-201ENST00000509611 723 ntBASIC18.74■□□□□ 0.59
RPS3AP61247 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.74■□□□□ 0.59
RPS3AP61247 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPS3AP61247 AC005181.1-201ENST00000604782 1256 ntBASIC18.74■□□□□ 0.59
RPS3AP61247 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.74■□□□□ 0.59
RPS3AP61247 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RPS3AP61247 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPS3AP61247 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPS3AP61247 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RPS3AP61247 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RPS3AP61247 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RPS3AP61247 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RPS3AP61247 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.74■□□□□ 0.59
RPS3AP61247 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPS3AP61247 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPS3AP61247 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.73■□□□□ 0.59
RPS3AP61247 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.73■□□□□ 0.59
RPS3AP61247 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPS3AP61247 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPS3AP61247 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPS3AP61247 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPS3AP61247 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RPS3AP61247 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.73■□□□□ 0.59
RPS3AP61247 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RPS3AP61247 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RPS3AP61247 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPS3AP61247 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.73■□□□□ 0.59
RPS3AP61247 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RPS3AP61247 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.73■□□□□ 0.59
RPS3AP61247 AC005082.1-201ENST00000413042 2259 ntBASIC18.73■□□□□ 0.59
RPS3AP61247 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.73■□□□□ 0.59
RPS3AP61247 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RPS3AP61247 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RPS3AP61247 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPS3AP61247 RBM17P2-201ENST00000616397 1405 ntBASIC18.73■□□□□ 0.59
RPS3AP61247 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPS3AP61247 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPS3AP61247 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
RPS3AP61247 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPS3AP61247 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RPS3AP61247 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPS3AP61247 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.72■□□□□ 0.59
RPS3AP61247 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPS3AP61247 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RPS3AP61247 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.72■□□□□ 0.59
RPS3AP61247 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RPS3AP61247 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.72■□□□□ 0.59
RPS3AP61247 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.72■□□□□ 0.59
RPS3AP61247 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RPS3AP61247 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.72■□□□□ 0.59
RPS3AP61247 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RPS3AP61247 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPS3AP61247 AC027702.1-201ENST00000563810 1770 ntBASIC18.72■□□□□ 0.59
RPS3AP61247 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.72■□□□□ 0.59
RPS3AP61247 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.72■□□□□ 0.59
RPS3AP61247 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.72■□□□□ 0.59
RPS3AP61247 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.71■□□□□ 0.59
RPS3AP61247 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPS3AP61247 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.71■□□□□ 0.59
RPS3AP61247 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPS3AP61247 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPS3AP61247 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.71■□□□□ 0.59
RPS3AP61247 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.71■□□□□ 0.59
RPS3AP61247 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPS3AP61247 CROCCP5-201ENST00000436658 830 ntBASIC18.71■□□□□ 0.59
RPS3AP61247 CNN2P6-201ENST00000439038 900 ntBASIC18.71■□□□□ 0.59
RPS3AP61247 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.71■□□□□ 0.59
RPS3AP61247 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPS3AP61247 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.71■□□□□ 0.59
RPS3AP61247 AC008694.1-202ENST00000636953 945 ntBASIC18.71■□□□□ 0.59
RPS3AP61247 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RPS3AP61247 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPS3AP61247 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPS3AP61247 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RPS3AP61247 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPS3AP61247 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPS3AP61247 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
RPS3AP61247 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPS3AP61247 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.71■□□□□ 0.59
RPS3AP61247 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPS3AP61247 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS3AP61247 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
RPS3AP61247 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS3AP61247 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS3AP61247 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
RPS3AP61247 AL158211.5-201ENST00000623583 2518 ntBASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms