Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
EIF3EP60228 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
EIF3EP60228 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
EIF3EP60228 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.71■□□□□ 0.91
EIF3EP60228 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EIF3EP60228 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
EIF3EP60228 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EIF3EP60228 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.71■□□□□ 0.91
EIF3EP60228 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.71■□□□□ 0.91
EIF3EP60228 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.71■□□□□ 0.91
EIF3EP60228 BID-214ENST00000617586 542 ntTSL 5 BASIC20.71■□□□□ 0.91
EIF3EP60228 AC100791.3-201ENST00000617619 330 ntBASIC20.71■□□□□ 0.91
EIF3EP60228 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.71■□□□□ 0.91
EIF3EP60228 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
EIF3EP60228 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
EIF3EP60228 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EIF3EP60228 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EIF3EP60228 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EIF3EP60228 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.71■□□□□ 0.91
EIF3EP60228 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EIF3EP60228 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.71■□□□□ 0.91
EIF3EP60228 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.71■□□□□ 0.91
EIF3EP60228 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
EIF3EP60228 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.91
EIF3EP60228 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.91
EIF3EP60228 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
EIF3EP60228 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EIF3EP60228 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.7■□□□□ 0.9
EIF3EP60228 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EIF3EP60228 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.7■□□□□ 0.9
EIF3EP60228 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EIF3EP60228 MIR5787-201ENST00000611784 55 ntBASIC20.7■□□□□ 0.9
EIF3EP60228 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.7■□□□□ 0.9
EIF3EP60228 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
EIF3EP60228 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.7■□□□□ 0.9
EIF3EP60228 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EIF3EP60228 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
EIF3EP60228 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EIF3EP60228 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EIF3EP60228 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.69■□□□□ 0.9
EIF3EP60228 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.69■□□□□ 0.9
EIF3EP60228 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
EIF3EP60228 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
EIF3EP60228 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
EIF3EP60228 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EIF3EP60228 CYP2T1P-201ENST00000432607 1285 ntBASIC20.69■□□□□ 0.9
EIF3EP60228 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.69■□□□□ 0.9
EIF3EP60228 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.69■□□□□ 0.9
EIF3EP60228 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.69■□□□□ 0.9
EIF3EP60228 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EIF3EP60228 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EIF3EP60228 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
EIF3EP60228 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EIF3EP60228 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EIF3EP60228 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
EIF3EP60228 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.69■□□□□ 0.9
EIF3EP60228 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.68■□□□□ 0.9
EIF3EP60228 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
EIF3EP60228 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.68■□□□□ 0.9
EIF3EP60228 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
EIF3EP60228 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.68■□□□□ 0.9
EIF3EP60228 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
EIF3EP60228 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.68■□□□□ 0.9
EIF3EP60228 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
EIF3EP60228 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EIF3EP60228 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.68■□□□□ 0.9
EIF3EP60228 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EIF3EP60228 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.68■□□□□ 0.9
EIF3EP60228 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
EIF3EP60228 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EIF3EP60228 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EIF3EP60228 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EIF3EP60228 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.68■□□□□ 0.9
EIF3EP60228 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
EIF3EP60228 AC125437.2-201ENST00000625180 2167 ntBASIC20.68■□□□□ 0.9
EIF3EP60228 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
EIF3EP60228 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
EIF3EP60228 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
EIF3EP60228 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EIF3EP60228 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
EIF3EP60228 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.67■□□□□ 0.9
EIF3EP60228 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EIF3EP60228 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EIF3EP60228 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EIF3EP60228 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EIF3EP60228 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
EIF3EP60228 KRT18P68-201ENST00000392293 1000 ntBASIC20.67■□□□□ 0.9
EIF3EP60228 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
EIF3EP60228 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.67■□□□□ 0.9
EIF3EP60228 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.67■□□□□ 0.9
EIF3EP60228 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.67■□□□□ 0.9
EIF3EP60228 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.67■□□□□ 0.9
EIF3EP60228 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EIF3EP60228 AC069236.1-201ENST00000604339 616 ntBASIC20.67■□□□□ 0.9
EIF3EP60228 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EIF3EP60228 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EIF3EP60228 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.67■□□□□ 0.9
EIF3EP60228 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.67■□□□□ 0.9
EIF3EP60228 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
EIF3EP60228 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms