Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
POLR2JP52435 AC004854.2-201ENST00000608450 1441 ntBASIC19.18■□□□□ 0.66
POLR2JP52435 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
POLR2JP52435 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR2JP52435 AC098818.2-201ENST00000564925 2320 ntBASIC19.18■□□□□ 0.66
POLR2JP52435 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR2JP52435 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR2JP52435 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
POLR2JP52435 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.18■□□□□ 0.66
POLR2JP52435 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR2JP52435 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR2JP52435 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR2JP52435 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.18■□□□□ 0.66
POLR2JP52435 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.18■□□□□ 0.66
POLR2JP52435 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.18■□□□□ 0.66
POLR2JP52435 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
POLR2JP52435 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
POLR2JP52435 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR2JP52435 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
POLR2JP52435 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
POLR2JP52435 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
POLR2JP52435 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
POLR2JP52435 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.17■□□□□ 0.66
POLR2JP52435 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR2JP52435 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
POLR2JP52435 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.17■□□□□ 0.66
POLR2JP52435 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR2JP52435 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
POLR2JP52435 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.17■□□□□ 0.66
POLR2JP52435 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
POLR2JP52435 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
POLR2JP52435 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.17■□□□□ 0.66
POLR2JP52435 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR2JP52435 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.17■□□□□ 0.66
POLR2JP52435 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.17■□□□□ 0.66
POLR2JP52435 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR2JP52435 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.17■□□□□ 0.66
POLR2JP52435 AL020996.1-203ENST00000536896 2307 ntBASIC19.17■□□□□ 0.66
POLR2JP52435 AC005332.7-201ENST00000614046 2005 ntBASIC19.17■□□□□ 0.66
POLR2JP52435 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR2JP52435 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.16■□□□□ 0.66
POLR2JP52435 TREX1-205ENST00000625293 1783 ntBASIC19.16■□□□□ 0.66
POLR2JP52435 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
POLR2JP52435 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR2JP52435 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR2JP52435 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR2JP52435 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR2JP52435 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR2JP52435 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
POLR2JP52435 PGM5P4-201ENST00000421970 445 ntBASIC19.16■□□□□ 0.66
POLR2JP52435 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.16■□□□□ 0.66
POLR2JP52435 AC097381.1-201ENST00000429019 1296 ntBASIC19.16■□□□□ 0.66
POLR2JP52435 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.16■□□□□ 0.66
POLR2JP52435 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.16■□□□□ 0.66
POLR2JP52435 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.16■□□□□ 0.66
POLR2JP52435 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR2JP52435 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
POLR2JP52435 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
POLR2JP52435 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR2JP52435 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR2JP52435 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
POLR2JP52435 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
POLR2JP52435 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.16■□□□□ 0.66
POLR2JP52435 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR2JP52435 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
POLR2JP52435 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
POLR2JP52435 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR2JP52435 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.15■□□□□ 0.66
POLR2JP52435 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR2JP52435 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.15■□□□□ 0.66
POLR2JP52435 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR2JP52435 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
POLR2JP52435 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.15■□□□□ 0.66
POLR2JP52435 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
POLR2JP52435 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
POLR2JP52435 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
POLR2JP52435 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR2JP52435 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.15■□□□□ 0.66
POLR2JP52435 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
POLR2JP52435 YBX1P1-201ENST00000445822 960 ntBASIC19.15■□□□□ 0.66
POLR2JP52435 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.15■□□□□ 0.66
POLR2JP52435 KRT18P14-201ENST00000534205 1250 ntBASIC19.15■□□□□ 0.66
POLR2JP52435 AL356652.1-201ENST00000615962 565 ntBASIC19.15■□□□□ 0.66
POLR2JP52435 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.15■□□□□ 0.66
POLR2JP52435 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
POLR2JP52435 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.15■□□□□ 0.66
POLR2JP52435 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.15■□□□□ 0.66
POLR2JP52435 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR2JP52435 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.15■□□□□ 0.66
POLR2JP52435 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR2JP52435 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.15■□□□□ 0.66
POLR2JP52435 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR2JP52435 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
POLR2JP52435 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.14■□□□□ 0.65
POLR2JP52435 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
POLR2JP52435 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.14■□□□□ 0.65
POLR2JP52435 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.14■□□□□ 0.65
POLR2JP52435 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.14■□□□□ 0.65
POLR2JP52435 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
POLR2JP52435 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms